RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 EOMESO95936 686 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 ATF7P17544 494 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 EPHA4P54764 986 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 PPP2R5CQ13362 524 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 KCNC3Q14003 757 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 NAA30Q147X3 362 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 KCNT2Q6UVM3 1135 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 NEK8Q86SG6 692 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 VN1R2Q8NFZ6 395 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 MRPS27Q92552 414 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 HAS1Q92839 578 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 FAM122AQ96E09 287 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 POP1Q99575 1024 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 FDXACB1Q9BRP7 624 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 CHST12Q9NRB3 414 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 DACT1Q9NYF0 836 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 SUCLA2Q9P2R7 463 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 PUF60Q9UHX1 559 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 KAT6AQ92794 2004 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 J3QL48 77 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 MAFO75444 373 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ADH1AP07327 375 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 GCFC2P16383 781 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 QARSP47897 775 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 DNM2P50570 870 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 SMTNP53814 917 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 NPEPPSP55786 919 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ANAPC15P60006 121 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 RBM10P98175 930 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 EARS2Q5JPH6 523 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 TBCELQ5QJ74 424 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 PLA2G4FQ68DD2 849 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 TMEM184AQ6ZMB5 413 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ZNF410Q86VK4 478 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ABI1Q8IZP0 508 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 CYP4X1Q8N118 509 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 LRRC43Q8N309 656 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 RNF169Q8NCN4 708 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ZNF558Q96NG5 402 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 JPH2Q9BR39 696 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 NGRNQ9NPE2 291 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 WRAP73Q9P2S5 460 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 BARX2Q9UMQ3 279 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 HCN4Q9Y3Q4 1203 aa10.38□□□□□ -0.75
CTNNA1-221ENST00000520339 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 A6NJY4 79 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 HIDE1A8MVS5 230 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 LOC730098B7Z3J9 87 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 TBX3O15119 743 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 ZIC2O95409 532 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 IL2RAP01589 272 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 P4HBP07237 508 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 FDPSP14324 419 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 XBP1P17861 261 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PPM1AP35813 382 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PBX3P40426 434 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PHKA2P46019 1235 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 AK2P54819 239 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 KRT17Q04695 432 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 EPHA7Q15375 998 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 HERC4Q5GLZ8 1057 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PLPP4Q5VZY2 271 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PIK3AP1Q6ZUJ8 805 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 RHPN2Q8IUC4 686 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 KSR1Q8IVT5 923 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 SLC39A11Q8N1S5 342 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 SUSD6Q92537 303 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 TCF25Q9BQ70 676 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 S1PR5Q9H228 398 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 DHX33Q9H6R0 707 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 IFT122Q9HBG6 1241 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 CYP26B1Q9NR63 512 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 SCHIP1Q9P0W5 487 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 MUTYHQ9UIF7 546 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 USP15Q9Y4E8 981 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 PPME1Q9Y570 386 aa10.37□□□□□ -0.75
CTNNA1-221ENST00000520339 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 CCNT1O60563 726 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 ICMTO60725 284 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 DKC1O60832 514 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 ZNF623O75123 536 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 SFPQP23246 707 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 BCAR1P56945 870 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 ME3Q16798 604 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 SYCE2Q6PIF2 218 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 SLC9A9Q8IVB4 645 aa10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 MRPL43Q8N983 215 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-221ENST00000520339 NECAB1Q8N987 351 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms