RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 OR7D4Q8NG98 312 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 PLBD2Q8NHP8 589 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 LPPQ93052 612 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZBTB8AQ96BR9 441 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 APIPQ96GX9 242 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 LIN37Q96GY3 246 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZC3H10Q96K80 434 aaKnown RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 CCDC138Q96M89 665 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 NOX5Q96PH1 765 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 DMRTA2Q96SC8 542 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 C22orf23Q9BZE7 217 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 LRRC27Q9C0I9 530 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 NSUN3Q9H649 340 aaKnown RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 RSAD1Q9HA92 442 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 LMBRD1Q9NUN5 540 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 RTEL1Q9NZ71 1219 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 SIK3Q9Y2K2 1263 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 ABHD14A-ACY1A0A1B0GW23 586 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 TCEA3O75764 348 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 KLHL18O94889 574 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 FTH1P19P0C7X4 201 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZNF28P17035 718 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 CRHR1P34998 444 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 STAT5BP51692 787 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 KCNQ1P51787 676 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 MLLT6P55198 1093 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 TARDBPQ13148 414 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 TMEM132EQ6IEE7 984 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 XRRA1Q6P2D8 792 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 HEATR3Q7Z4Q2 680 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 DEPTORQ8TB45 409 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZCCHC14Q8WYQ9 949 aaKnown RBP6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 PHKBQ93100 1093 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 SLC35A4Q96G79 324 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 SGCZQ96LD1 299 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 C14orf93Q9H972 538 aaKnown RBP6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 ATP6V0A4Q9HBG4 840 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 TRPS1Q9UHF7 1281 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 CDC42EP3Q9UKI2 254 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 TPCN1Q9ULQ1 816 aa6.58□□□□□ -1.36
HMGB1P46-201ENST00000520062 SCO2A0A1W2PP80 73 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 MTSS1O43312 755 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 TYRP14679 529 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 SREBF1P36956 1147 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 EPHB3P54753 998 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 PER3P56645 1201 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 TLE1Q04724 770 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 ERAP2Q6P179 960 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 C1orf228Q6PIY5 440 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 RSPH3Q86UC2 560 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 RTKN2Q8IZC4 609 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 PQLC1Q8N2U9 271 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 MSL3Q8N5Y2 521 aaKnown RBP6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 IFI44Q8TCB0 444 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 ANKS1AQ92625 1134 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 DIRC2Q96SL1 478 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 TBCBQ99426 244 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 PDCD2LQ9BRP1 358 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 APOL5Q9BWW9 433 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 KATNBL1Q9H079 304 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 WDCPQ9H6R7 721 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 PTPRHQ9HD43 1115 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZFP64Q9NPA5 681 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 LANCL2Q9NS86 450 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 GPRC5DQ9NZD1 345 aa6.57□□□□□ -1.36
HMGB1P46-201ENST00000520062 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 LRRC14BA6NHZ5 514 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 RHPN2P1A8MT19 583 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 ISM1B1AKI9 464 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 H3BUI4 141 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 ALDH1A2O94788 518 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 GUCY1A2P33402 732 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 IL13P35225 146 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 MEOX1P50221 254 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 CASP5P51878 434 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 SMAD4Q13485 552 aaKnown RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PLS1Q14651 629 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZNF827Q17R98 1081 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 KHDC1Q4VXA5 237 aaKnown RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 GADL1Q6ZQY3 521 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PRR23BQ6ZRT6 265 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 OR2C3Q8N628 320 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 CASKIN2Q8WXE0 1202 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 UHRF1Q96T88 793 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 ZMAT3Q9HA38 289 aaKnown RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 GCM1Q9NP62 436 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 TLR9Q9NR96 1032 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PNPOQ9NVS9 261 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 FEZ2Q9UHY8 353 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PADI4Q9UM07 663 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 CTDP1Q9Y5B0 961 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 PMF1-BGLAPU3KQ54 211 aa6.56□□□□□ -1.36
HMGB1P46-201ENST00000520062 GYPEP15421 78 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 MALP21145 153 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 PIK3CBP42338 1070 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 KIR2DL3P43628 341 aa6.55□□□□□ -1.36
HMGB1P46-201ENST00000520062 LIMS1P48059 325 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms