RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 POF1BQ8WVV4 589 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 GAD1Q99259 594 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 ACO2Q99798 780 aaKnown RBP20.21■□□□□ 0.83
SREK1-207ENST00000520058 TMEM175Q9BSA9 504 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
SREK1-207ENST00000520058 MAGEF1Q9HAY2 307 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 TLR9Q9NR96 1032 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 THEGQ9P2T0 379 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 SEL1LQ9UBV2 794 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 PCDHA7Q9UN72 937 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 HES2Q9Y543 173 aa20.21■□□□□ 0.83
SREK1-207ENST00000520058 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 POMCP01189 267 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 MLH1P40692 756 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.82
SREK1-207ENST00000520058 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
SREK1-207ENST00000520058 NCKAP1LP55160 1127 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 ZNF568Q3ZCX4 644 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 NT5DC1Q5TFE4 455 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 ZPBP2Q6X784 338 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 MRPS27Q92552 414 aaKnown RBP20.2■□□□□ 0.82
SREK1-207ENST00000520058 DDX12PQ92771 950 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
SREK1-207ENST00000520058 TNMDQ9H2S6 317 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
SREK1-207ENST00000520058 MYO7AQ13402 2215 aa20.2■□□□□ 0.82
SREK1-207ENST00000520058 INPPL1O15357 1258 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 TOM1L1O75674 476 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
SREK1-207ENST00000520058 IDEP14735 1019 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 AKAP5P24588 427 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 MPZL3Q6UWV2 235 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 SLC39A11Q8N1S5 342 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 HLA-CQ95604 372 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 NRDE2Q9H7Z3 1164 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 SNTG2Q9NY99 539 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 HCSTQ9UBK5 93 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 FAN1Q9Y2M0 1017 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
SREK1-207ENST00000520058 COL6A3P12111 3177 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 CLDN3O15551 220 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 MCF2P10911 925 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
SREK1-207ENST00000520058 GRIK3Q13003 919 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
SREK1-207ENST00000520058 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 KCNN1Q92952 543 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 DHX58Q96C10 678 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 TARS2Q9BW92 718 aaKnown RBP20.18■□□□□ 0.82
SREK1-207ENST00000520058 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 NGRNQ9NPE2 291 aaKnown RBP20.18■□□□□ 0.82
SREK1-207ENST00000520058 ENTPD7Q9NQZ7 604 aa20.18■□□□□ 0.82
SREK1-207ENST00000520058 MYMKA6NI61 221 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 HNRNPDLO14979 420 aaKnown RBP20.17■□□□□ 0.82
SREK1-207ENST00000520058 GALTP07902 379 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 LIG4P49917 911 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 SCNN1GP51170 649 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 KYAT1Q16773 422 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 TCEAL5Q5H9L2 206 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 RESP18Q5W5W9 173 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 ADALQ6DHV7 355 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 STXBP4Q6ZWJ1 553 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 TMC7Q7Z402 723 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 ZBTB33Q86T24 672 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 CEP57L1Q8IYX8 460 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 TMEM87AQ8NBN3 555 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 LEO1Q8WVC0 666 aaPredicted RBP20.17■□□□□ 0.82
SREK1-207ENST00000520058 ATXN2LQ8WWM7 1075 aaKnown RBP20.17■□□□□ 0.82
SREK1-207ENST00000520058 HVCN1Q96D96 273 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 IGSF21Q96ID5 467 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 ZFP42Q96MM3 310 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 COLEC11Q9BWP8 271 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
SREK1-207ENST00000520058 KLK14Q9P0G3 267 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 ANKFY1Q9P2R3 1169 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 TBX20Q9UMR3 447 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 EXOC7Q9UPT5 735 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
SREK1-207ENST00000520058 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
SREK1-207ENST00000520058 POLR2DO15514 142 aaKnown RBP20.16■□□□□ 0.82
SREK1-207ENST00000520058 RECQL4O94761 1208 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 CSPG5O95196 566 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 THP07101 528 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 PBX3P40426 434 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 GRM5P41594 1212 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 OR1G1P47890 313 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 ALCAMQ13740 583 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 NOLC1Q14978 699 aaKnown RBP eCLIP20.16■□□□□ 0.82
SREK1-207ENST00000520058 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
SREK1-207ENST00000520058 EEF1DP3Q658K8 133 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 ZNF280BQ86YH2 543 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 ACAP3Q96P50 834 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 ST6GALNAC4Q9H4F1 302 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 KCNH3Q9ULD8 1083 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 USP20Q9Y2K6 914 aa20.16■□□□□ 0.82
SREK1-207ENST00000520058 A0A087X0B3 334 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms