RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PDXKO00764 312 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 EIF3DO15371 548 aaKnown RBP eCLIP5.53□□□□□ -1.52
SDC2-204ENST00000519914 SART1O43290 800 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 PAX4O43316 350 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 TRPA1O75762 1119 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 GFPT2O94808 682 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 EEF2P13639 858 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 EIF4A3P38919 411 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 PRKCIP41743 596 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 SLC1A4P43007 532 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 TNNI2P48788 182 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 GP2P55259 537 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 ARHGAP4P98171 946 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 GHRHRQ02643 423 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 PICALMQ13492 652 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 ARSHQ5FYA8 562 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 NCAPH2Q6IBW4 605 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 CCNI2Q6ZMN8 369 aaPredicted RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 KRT27Q7Z3Y8 459 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 ZDHHC13Q8IUH4 622 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 NEK11Q8NG66 645 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 ERMNQ8TAM6 284 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 AENQ8WTP8 325 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 SCFD1Q8WVM8 642 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 ALS2CR12Q96Q35 445 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 MMS19Q96T76 1030 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 POP1Q99575 1024 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 IFIH1Q9BYX4 1025 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 LUC7LQ9NQ29 371 aaKnown RBP5.53□□□□□ -1.52
SDC2-204ENST00000519914 OLFML3Q9NRN5 406 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 STIM2Q9P246 746 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 VAV3Q9UKW4 847 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 MTMR7Q9Y216 660 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 HYOU1Q9Y4L1 999 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 PCDHGC5Q9Y5F6 944 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 ZNF536O15090 1300 aa5.53□□□□□ -1.52
SDC2-204ENST00000519914 DDTLA6NHG4 134 aaPredicted RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 E9PMD0 336 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 PDE2AO00408 941 aaPredicted RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 PES1O00541 588 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 CETN3O15182 167 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 TLR2O60603 784 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ADAM11O75078 769 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ADAMTS4O75173 837 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 MED24O75448 989 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 PRPF6O94906 941 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 EYA4O95677 639 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 NDUFB10O96000 172 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ACPPP15309 386 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 TAL1P17542 331 aaPredicted RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 GAP43P17677 238 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 PTPRAP18433 802 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SSR1P43307 286 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 MAGEA1P43355 309 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ICA1Q05084 483 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 PPP2R5CQ13362 524 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 GIT2Q14161 759 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 NAB2Q15742 525 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SLC18A3Q16572 532 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 CCDC96Q2M329 555 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SLC9C1Q4G0N8 1177 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 FAM83BQ5T0W9 1011 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 MEX3CQ5U5Q3 659 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 SYDE2Q5VT97 1194 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 KLHDC7AQ5VTJ3 777 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SFMBT2Q5VUG0 894 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 FKBP1CQ5VVH2 108 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 B3GNT9Q6UX72 402 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 KCTD1Q719H9 257 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 DYMQ7RTS9 669 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ATCAYQ86WG3 371 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 GPBP1Q86WP2 473 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 CATSPER3Q86XQ3 398 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 COL23A1Q86Y22 540 aaPredicted RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 C2CD5Q86YS7 1000 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ZFPM1Q8IX07 1006 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 C1orf131Q8NDD1 294 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 GLIS3Q8NEA6 775 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 COG1Q8WTW3 980 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 SLC7A3Q8WY07 619 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 HPS3Q969F9 1004 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 CAVIN3Q969G5 261 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 COL26A1Q96A83 441 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 BORCS6Q96GS4 357 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 OSBPL9Q96SU4 736 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 P2RX7Q99572 595 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 TACO1Q9BSH4 297 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 TLR10Q9BXR5 811 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 ELP3Q9H9T3 547 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
SDC2-204ENST00000519914 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
SDC2-204ENST00000519914 TUFT1Q9NNX1 390 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms