RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SHISA7A6NL88 538 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 F8W810 466 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 SLC27A2O14975 620 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 ADAMTS3O15072 1205 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 MSH4O15457 936 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 GAS7O60861 476 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 PSMD10O75832 226 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 RETP07949 1114 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 PMLP29590 882 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 FZD5Q13467 585 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 PFKFB3Q16875 520 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 USP41Q3LFD5 358 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 LRCH2Q5VUJ6 765 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 TPRG1Q6ZUI0 275 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 CCDC12Q8WUD4 166 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 DNASE1L2Q92874 299 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 CCDC51Q96ER9 411 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 NLRP4Q96MN2 994 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 TEKT3Q9BXF9 490 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 LRRC2Q9BYS8 371 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 LSG1Q9H089 658 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 CHRDQ9H2X0 955 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 ANGPTL2Q9UKU9 493 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 COL4A3BPQ9Y5P4 624 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 SPEGQ15772 3267 aa9.41□□□□□ -0.9
CTNNA1-215ENST00000519309 TMEM150BA6NC51 233 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 ARL5CA6NH57 179 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 NCAM2O15394 837 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 ZBTB43O43298 467 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 CHMP2AO43633 222 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 EDIL3O43854 480 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 GAS2O43903 313 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 FOXD2O60548 495 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 MYBP10242 640 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 MLH1P40692 756 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 OR1G1P47890 313 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SCNN1GP51170 649 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 MTAPQ13126 283 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 PCBP1Q15365 356 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 CSRP2Q16527 193 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SYNE3Q6ZMZ3 975 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 PRR23CQ6ZRP0 262 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 ANO5Q75V66 913 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 GRASPQ7Z6J2 395 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 KSR1Q8IVT5 923 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 NPAS3Q8IXF0 933 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 DDX1Q92499 740 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 KXD1Q9BQD3 176 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 GPR62Q9BZJ7 368 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 MINDY3Q9H8M7 445 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 C6orf50Q9HD87 102 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 ADAM28Q9UKQ2 775 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 KCNH3Q9ULD8 1083 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 MRPS17Q9Y2R5 130 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 IPPQ9Y573 584 aa9.4□□□□□ -0.9
CTNNA1-215ENST00000519309 SF3B1O75533 1304 aaKnown RBP eCLIP9.39□□□□□ -0.914e-6■■■■■ 92.3
CTNNA1-215ENST00000519309 GOLGA8AA7E2F4 631 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 GOLGA8BA8MQT2 603 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 NR1I2O75469 434 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ECI2O75521 394 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 C8AP07357 584 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ITGA4P13612 1032 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 CD72P21854 359 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 GNA11P29992 359 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 CDC27P30260 824 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 LIMK1P53667 647 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 NRLP54845 237 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 NTHL1P78549 312 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ADCY1Q08828 1119 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 DMWDQ09019 674 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 GRIK3Q13003 919 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 NECTIN1Q15223 517 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 RTP2Q5QGT7 225 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 LIN9Q5TKA1 542 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 CREB3L3Q68CJ9 461 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 TSSK4Q6SA08 328 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ZNF852Q6ZMS4 543 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 MIER3Q7Z3K6 550 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 GAD1Q99259 594 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 COLEC11Q9BWP8 271 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 DHX33Q9H6R0 707 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms