RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.11
CLN8-204ENST00000519254 MBLAC1A4D2B0 266 aaPredicted RBP15.76■□□□□ 0.11
CLN8-204ENST00000519254 KBTBD13C9JR72 458 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 ABL1P00519 1130 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 GNAT1P11488 350 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 ACTN1P12814 892 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 PON1P27169 355 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLN8-204ENST00000519254 ARHGAP25P42331 645 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 STRN3Q13033 797 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 MAP4K3Q8IVH8 894 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 ZBTB8OSQ8IWT0 167 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 KIAA0319LQ8IZA0 1049 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 NLRP7Q8WX94 980 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 WDR24Q96S15 920 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 IRX2Q9BZI1 471 aaPredicted RBP15.76■□□□□ 0.11
CLN8-204ENST00000519254 GTF2IRD1Q9UHL9 959 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 EXOC7Q9UPT5 735 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 GINS2Q9Y248 185 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 USP20Q9Y2K6 914 aa15.76■□□□□ 0.11
CLN8-204ENST00000519254 GTPBP10A4D1E9 387 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 MOXD2PA6NHM9 499 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 ANKRD63C9JTQ0 380 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 K7ERI5 159 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 ADAM17P78536 824 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 EXOC3L4Q17RC7 722 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 GDF6Q6KF10 455 aaPredicted RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 GBP6Q6ZN66 633 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 ZSWIM2Q8NEG5 633 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 DNAJB3Q8WWF6 145 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 SYN2Q92777 582 aaPredicted RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 GLT1D1Q96MS3 346 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 SIX2Q9NPC8 291 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 HSPBP1Q9NZL4 362 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 A0A087WZ62 844 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 A0A1W2PQ45 241 aaPredicted RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 A0A1W2PQY0 241 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 EIF3CLB5ME19 914 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 HNRNPDLO14979 420 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 ASAP2O43150 1006 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 CABYRO75952 493 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 ADSSP30520 456 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 CYLC1P35663 651 aaPredicted RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 FMO5P49326 533 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 NLRP11P59045 1033 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 GNG11P61952 73 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 ITGA7Q13683 1181 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 KLHDC7AQ5VTJ3 777 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 RDH13Q8NBN7 331 aa15.75■□□□□ 0.11
CLN8-204ENST00000519254 EIF3CQ99613 913 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
CLN8-204ENST00000519254 GRIN2DO15399 1336 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 SMIM35A0A1B0GVV1 85 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 INO80B-WBP1J3KQ70 363 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 CSDE1O75534 798 aaKnown RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 HOXC8P31273 242 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 EIF4A3P38919 411 aaKnown RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 PHKA2P46019 1235 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 BFSP1Q12934 665 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 KIZQ2M2Z5 673 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 SLC39A4Q6P5W5 647 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 GPIHBP1Q8IV16 184 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 XXYLT1Q8NBI6 393 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 TSEN34Q9BSV6 310 aaKnown RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 INO80BQ9C086 356 aaPredicted RBP15.74■□□□□ 0.11
CLN8-204ENST00000519254 C2orf40Q9H1Z8 148 aa15.74■□□□□ 0.11
CLN8-204ENST00000519254 ZNF263O14978 683 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 MAPK13O15264 365 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 UCHL3P15374 230 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 ABCD1P33897 745 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 LIG4P49917 911 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 GPC3P51654 580 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 EFNA5P52803 228 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 MCCD1P59942 119 aaPredicted RBP15.73■□□□□ 0.11
CLN8-204ENST00000519254 CBWD6Q4V339 395 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 CBWD3Q5JTY5 395 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 CBWD5Q5RIA9 395 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 SFMBT2Q5VUG0 894 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 CCDC42Q96M95 316 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 STARD7Q9NQZ5 370 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
CLN8-204ENST00000519254 EDN1P05305 212 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 PRKCBP05771 671 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 PTENP60484 403 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 DLG4P78352 724 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 KRT83P78385 493 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
CLN8-204ENST00000519254 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
CLN8-204ENST00000519254 MAPK6Q16659 721 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 ASTE1Q2TB18 679 aaPredicted RBP15.72■□□□□ 0.11
CLN8-204ENST00000519254 ARHGAP29Q52LW3 1261 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 C1orf220Q5T0J3 134 aa15.72■□□□□ 0.11
CLN8-204ENST00000519254 ZNF662Q6ZS27 426 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms