RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 METTL13Q8N6R0 699 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 TUT1Q9H6E5 874 aaKnown RBP12.77□□□□□ -0.37
SPIDR-203ENST00000517693 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-203ENST00000517693 RBAKQ9NYW8 714 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-203ENST00000517693 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 INTUQ9ULD6 942 aa12.77□□□□□ -0.37
SPIDR-203ENST00000517693 ABT1Q9ULW3 272 aaKnown RBP12.77□□□□□ -0.37
SPIDR-203ENST00000517693 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 ZEB2O60315 1214 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 INSRRP14616 1297 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 SMPD1P17405 629 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CPT1AP50416 773 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 DLG4P78352 724 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CLDN10P78369 228 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TMEM132AQ24JP5 1023 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 APBB1IPQ7Z5R6 666 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 LMO3Q8TAP4 145 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TARS2Q9BW92 718 aaKnown RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 RAB20Q9NX57 234 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 MRFAP1Q9Y605 127 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 ACKR2O00590 384 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 OGTO15294 1046 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 EVI5O60447 810 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 MSCO60682 206 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 SRGAP2CP0DJJ0 459 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TM4SF4P48230 202 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 PTENP60484 403 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 POU5F1Q01860 360 aaKnown RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CYP27A1Q02318 531 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 PPFIA1Q13136 1202 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 C1orf220Q5T0J3 134 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 LRRC71Q8N4P6 559 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 NLRP4Q96MN2 994 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 CGRRF1Q99675 332 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 C16orf70Q9BSU1 422 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 IMPG2Q9BZV3 1241 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 UBE2TQ9NPD8 197 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-203ENST00000517693 C1orf112Q9NSG2 853 aa12.76□□□□□ -0.37
SPIDR-203ENST00000517693 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 CA12O43570 354 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 TNNI1P19237 187 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 APBA1Q02410 837 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-203ENST00000517693 PTK2Q05397 1052 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 MCL1Q07820 350 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
SPIDR-203ENST00000517693 KIF22Q14807 665 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 PCBP1Q15365 356 aaKnown RBP eCLIP12.75□□□□□ -0.37
SPIDR-203ENST00000517693 NAB2Q15742 525 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 WHAMMP3Q1A5X7 153 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 MPZL3Q6UWV2 235 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 TSHZ1Q6ZSZ6 1077 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 ZNF410Q86VK4 478 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 USP6NLQ92738 828 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 ACO2Q99798 780 aaKnown RBP12.75□□□□□ -0.37
SPIDR-203ENST00000517693 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 ADAMTS1Q9UHI8 967 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 CDC23Q9UJX2 597 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 AKT3Q9Y243 479 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 JRKLQ9Y4A0 524 aa12.75□□□□□ -0.37
SPIDR-203ENST00000517693 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 A6NJR5 290 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 FAM155AB1AL88 458 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 ZNF263O14978 683 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 ZNF286BP0CG31 522 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 KLRC1P26715 233 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 CLCN3P51790 818 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 FCGRTP55899 365 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 IGBP1P78318 339 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 GCNT1Q02742 428 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 GRIK4Q16099 956 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 SV2AQ7L0J3 742 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 PLEKHO2Q8TD55 490 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 INO80BQ9C086 356 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-203ENST00000517693 FZD8Q9H461 694 aa12.74□□□□□ -0.37
SPIDR-203ENST00000517693 RNPEPQ9H4A4 650 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms