RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 OTOP2Q7RTS6 562 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 TMCO2Q7Z6W1 182 aaPredicted RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 ECHDC2Q86YB7 292 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 C12orf56Q8IXR9 622 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 MLKLQ8NB16 471 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 TMEM174Q8WUU8 243 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 HERVK_113Q902F9 699 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 LPPQ93052 612 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 CCDC51Q96ER9 411 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 NXF3Q9H4D5 531 aaKnown RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 TMEM206Q9H813 350 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 FAM105AQ9NUU6 356 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
CLN8-202ENST00000517514 TRAF3IP3Q9Y228 551 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 HES2Q9Y543 173 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 PCDHB2Q9Y5E7 798 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 CHD7Q9P2D1 2997 aa10.82□□□□□ -0.68
CLN8-202ENST00000517514 PDXKO00764 312 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 MCF2P10911 925 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 GARTP22102 1010 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 TNFSF9P41273 254 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 AFF1P51825 1210 aaKnown RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 STX17P56962 302 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 MLLT1Q03111 559 aaPredicted RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 IKBKEQ14164 716 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 NOLC1Q14978 699 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLN8-202ENST00000517514 NFIL3Q16649 462 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 TWF2Q6IBS0 349 aaKnown RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 KLHL10Q6JEL2 608 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 LRRC55Q6ZSA7 311 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 STXBP4Q6ZWJ1 553 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 SLC24A5Q71RS6 500 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 NELFBQ8WX92 580 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 P2RX5Q93086 422 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 SYAP1Q96A49 352 aaPredicted RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 BICD1Q96G01 975 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 DHTKD1Q96HY7 919 aaPredicted RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 FBXL18Q96ME1 805 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 LBHD1Q9BQE6 289 aaPredicted RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 FTHL17Q9BXU8 183 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 GZF1Q9H116 711 aaPredicted RBP10.81□□□□□ -0.68
CLN8-202ENST00000517514 PCIF1Q9H4Z3 704 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 ANKFY1Q9P2R3 1169 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 EXOC7Q9UPT5 735 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 IPPQ9Y573 584 aa10.81□□□□□ -0.68
CLN8-202ENST00000517514 GOLGA8IPA6NC78 632 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 GOLGA8JA6NMD2 632 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 OGTO15294 1046 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 CLDN3O15551 220 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 BAIAP3O94812 1187 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 ADRB2P07550 413 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 GRM5P41594 1212 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 CASP4P49662 377 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 GATMP50440 423 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 ZNF568Q3ZCX4 644 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 FAM109BQ6ICB4 259 aaPredicted RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 PSRC1Q6PGN9 363 aaPredicted RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 FOXR2Q6PJQ5 311 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 IRF2BP1Q8IU81 584 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 TMEM130Q8N3G9 435 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 GSTCDQ8NEC7 633 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 PLEKHO2Q8TD55 490 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 POMGNT1Q8WZA1 660 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 SAAL1Q96ER3 474 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 GTPBP4Q9BZE4 634 aaKnown RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 DNAJC25Q9H1X3 360 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 RC3H2Q9HBD1 1191 aaKnown RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 C1orf112Q9NSG2 853 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 MIOSQ9NXC5 875 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 SNTG2Q9NY99 539 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
CLN8-202ENST00000517514 CPSF3Q9UKF6 684 aaKnown RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 AGO2Q9UKV8 859 aaKnown RBP10.8□□□□□ -0.68
CLN8-202ENST00000517514 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 B4GALT3O60512 393 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 RECQL4O94761 1208 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
CLN8-202ENST00000517514 NR3C1P04150 777 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 STAG3L1P0CL83 205 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 AKAP5P24588 427 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 BMP8BP34820 402 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 ACOT2P49753 483 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 CYP2J2P51589 502 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
CLN8-202ENST00000517514 OSTNP61366 133 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 SNRPFP62306 86 aaKnown RBP10.79□□□□□ -0.68
CLN8-202ENST00000517514 PAK1Q13153 545 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 NCAPHQ15003 741 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 ENOX2Q16206 610 aaKnown RBP10.79□□□□□ -0.68
CLN8-202ENST00000517514 STX1AQ16623 288 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 EDRF1Q3B7T1 1238 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 SLC10A6Q3KNW5 377 aa10.79□□□□□ -0.68
CLN8-202ENST00000517514 DCAF4L1Q3SXM0 396 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms