RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 IGSF22Q8N9C0 903 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LINC00301Q8NCQ3 95 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NEK9Q8TD19 979 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LMBR1Q8WVP7 490 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TRIM43Q96BQ3 446 aaPredicted RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZBTB10Q96DT7 871 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CDK5RAP3Q96JB5 506 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CHAMP1Q96JM3 812 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CEP170P1Q96L14 293 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCDC43Q96MW1 224 aaKnown RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CLIC6Q96NY7 704 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PLIN2Q99541 437 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 POLR3CQ9BUI4 534 aaPredicted RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RSRP1Q9BUV0 290 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NOC4LQ9BVI4 516 aaKnown RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PANK2Q9BZ23 570 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FAM49AQ9H0Q0 323 aaPredicted RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TUFT1Q9NNX1 390 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KBTBD4Q9NVX7 518 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SALL4Q9UJQ4 1053 aa6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SRPRBQ9Y5M8 271 aaKnown RBP6.46□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DOCK5Q9H7D0 1870 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 H0YGN5 161 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ATXN7O15265 892 aaPredicted RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MAGEB2O15479 319 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PPP6R2O75170 966 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 STBD1O95210 358 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TIMP1P01033 207 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 XRCC6P12956 609 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ATF4P18848 351 aaPredicted RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RPA1P27694 616 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CYP2C18P33260 490 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DDIT3P35638 169 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LONP1P36776 959 aaKnown RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ME1P48163 572 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCL23P55773 120 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 NPEPPSP55786 919 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TBC1D8BQ0IIM8 1120 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TMEM62Q0P6H9 643 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 BFSP2Q13515 415 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MARCH8Q5T0T0 291 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 EFCAB12Q6NXP0 572 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TAF2Q6P1X5 1199 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ANO5Q75V66 913 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RSPH3Q86UC2 560 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CABP7Q86V35 215 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RELL1Q8IUW5 271 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCDC155Q8N6L0 562 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 C3orf58Q8NDZ4 430 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 OR13H1Q8NG92 308 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PIGOQ8TEQ8 1089 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DNAJB3Q8WWF6 145 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CALML4Q96GE6 196 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 AK8Q96MA6 479 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZFP42Q96MM3 310 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LBHD1Q9BQE6 289 aaPredicted RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CSRNP2Q9H175 543 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 HIPK3Q9H422 1215 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PDLIM7Q9NR12 457 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CYP26B1Q9NR63 512 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ANKEF1Q9NU02 776 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CHMP5Q9NZZ3 219 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 WRAP73Q9P2S5 460 aaPredicted RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TUBE1Q9UJT0 475 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DNMT3LQ9UJW3 386 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FBXO2Q9UK22 296 aaPredicted RBP6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RCOR1Q9UKL0 485 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DNM3Q9UQ16 869 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 GINS2Q9Y248 185 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 PCDHA2Q9Y5H9 948 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 IGSF9BQ9UPX0 1349 aa6.45□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SMIM35A0A1B0GVV1 85 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ARHGEF35A5YM69 484 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 FAM187AA6NFU0 413 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RSPH10B2B2RC85 870 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ZBTB42B2RXF5 422 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 E9PMD0 336 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KIAA0355O15063 1070 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 LYPLA2O95372 231 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 YEATS4O95619 227 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 AVPP01185 164 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 SSBP05455 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RSPH10BP0C881 870 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RARAP10276 462 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TMOD1P28289 359 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DNM2P50570 870 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CLCN3P51790 818 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 POLGP54098 1239 aaPredicted RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 ADAM17P78536 824 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 DHX8Q14562 1220 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 KARSQ15046 597 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 TARBP2Q15633 366 aaKnown RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MFSD5Q6N075 450 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 RUFY4Q6ZNE9 571 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 USP49Q70CQ1 688 aa6.44□□□□□ -1.38
SCARNA6.1-201ENST00000516989 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms