RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 TMOD1P28289 359 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRDX5P30044 214 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STIP1P31948 543 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ELF1P32519 619 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SSTR3P32745 418 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CIITAP33076 1130 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SKIV2L2P42285 1042 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MMP13P45452 471 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SCTRP47872 440 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 QARSP47897 775 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SERPINB4P48594 390 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KLK7P49862 253 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP2J2P51589 502 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 JAK3P52333 1124 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STAT2P52630 851 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SEC24CP53992 1094 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC18A1P54219 525 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC12A3P55017 1021 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 AP2B1P63010 937 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MRPS25P82663 173 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MXRA7P84157 204 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MYL7Q01449 175 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DEUP1Q05D60 604 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KLRC3Q07444 240 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF844Q08AG5 666 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC15Q0P6D6 951 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAPK7Q13164 816 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DMP1Q13316 513 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DYNC1I2Q13409 638 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRPC3Q13507 836 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAP7Q14244 749 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIGHQ14442 188 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF268Q14587 947 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KIF22Q14807 665 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TCEAL1Q15170 157 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RBBP5Q15291 538 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TBCCQ15814 346 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC15A2Q16348 729 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 BMT2Q1RMZ1 405 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PARP6Q2NL67 630 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 QRICH1Q2TAL8 776 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KLHL38Q2WGJ6 581 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC4A8Q2Y0W8 1093 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM153CQ494X1 144 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC14Q49A88 953 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CEP55Q53EZ4 464 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 EAPPQ56P03 285 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM133BQ5BKY9 247 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC27A3Q5K4L6 730 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPDYAQ5MJ70 313 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 WASHC2DQ5SRD0 308 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 WLSQ5T9L3 541 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MEX3CQ5U5Q3 659 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SYDE2Q5VT97 1194 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 HGSNATQ68CP4 663 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RNF43Q68DV7 783 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DUPD1Q68J44 220 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 XRRA1Q6P2D8 792 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DCUN1D2Q6PH85 259 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PADI6Q6TGC4 694 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 C6orf89Q6UWU4 347 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RNF207Q6ZRF8 634 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TSHZ1Q6ZSZ6 1077 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCTD1Q719H9 257 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 OTOP1Q7RTM1 612 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NIPA1Q7RTP0 329 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF571Q7Z3V5 609 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPATA21Q7Z572 469 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMC3Q7Z5M5 1100 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIGWQ7Z7B1 504 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ADGRA1Q86SQ6 560 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TBC1D1Q86TI0 1168 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SFR1Q86XK3 245 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 THNSL1Q8IYQ7 743 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RPUSD2Q8IZ73 545 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FUKQ8N0W3 1084 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDIK1LQ8N165 341 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPM1KQ8N3J5 372 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 LARGE2Q8N3Y3 721 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TTC39CQ8N584 583 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KIAA0895Q8NCT3 520 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GMCL1P1Q8NEA9 526 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FBXL13Q8NEE6 735 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MCPH1Q8NEM0 835 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 RDM1Q8NG50 284 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPP1R14CQ8TAE6 165 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF398Q8TD17 642 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MICAL1Q8TDZ2 1067 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIGOQ8TEQ8 1089 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SH3TC2Q8TF17 1288 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PYROXD1Q8WU10 500 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 HDAC7Q8WUI4 952 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SCFD1Q8WVM8 642 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATXN2LQ8WWM7 1075 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 POMGNT1Q8WZA1 660 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 BAP1Q92560 729 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 N4BP2L2Q92802 583 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 INPP5DQ92835 1189 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP6V0A1Q93050 837 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms