RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HAUS7Q99871 368 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 OR10A5Q9H207 317 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 BTBD7Q9P203 1132 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 SPG7Q9UQ90 795 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 MTMR7Q9Y216 660 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 ADAMTS9Q9P2N4 1935 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 IGKV6D-21A0A0A0MT36 114 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 LDB3O75112 727 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 H2AFYO75367 372 aaKnown RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 BCAR3O75815 825 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 COL6A2P12110 1019 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 ECE1P42892 770 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 GZMKP49863 264 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 MXRA7P84157 204 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 KIZQ2M2Z5 673 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 CWF19L2Q2TBE0 894 aaKnown RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 INTS3Q68E01 1043 aaKnown RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 DMKNQ6E0U4 476 aaPredicted RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 ARMC6Q6NXE6 501 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 KCTD1Q719H9 257 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 LYG1Q8N1E2 194 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 LILRB2Q8N423 598 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 CLUAP1Q96AJ1 413 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 DOCK7Q96N67 2140 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 MMS19Q96T76 1030 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 TMEM204Q9BSN7 226 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 PPARGC1AQ9UBK2 798 aaKnown RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 MAGEL2Q9UJ55 1249 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 ST3GAL5Q9UNP4 418 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 USP15Q9Y4E8 981 aaPredicted RBP0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 CROCCQ5TZA2 2017 aa0.21□□□□□ -2.38
RNU6-539P-201ENST00000516665 EXTL3O43909 919 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 ORC4O43929 436 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 KCNH1O95259 989 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF883P0CG24 379 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 KRT9P35527 623 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 GRIA3P42263 894 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 KCNJ5P48544 419 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 SERPINB4P48594 390 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 SF1Q15637 639 aaKnown RBP0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 NFE2Q16621 373 aaPredicted RBP0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 XKR6Q5GH73 641 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 XKR4Q5GH76 650 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 DAB2IPQ5VWQ8 1189 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 GK5Q6ZS86 529 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 ADAT2Q7Z6V5 191 aaKnown RBP0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 PIP4P1Q86T03 277 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 DAAM2Q86T65 1068 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 FAM83AQ86UY5 434 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 XYLT1Q86Y38 959 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 GALNT16Q8N428 558 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 PLA2G15Q8NCC3 412 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 NUDCD2Q8WVJ2 157 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 IGFBPL1Q8WX77 278 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 RCC1LQ96I51 464 aaKnown RBP0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 LRRC3Q9BY71 257 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 ENKD1Q9H0I2 346 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 POT1Q9NUX5 634 aa0.2□□□□□ -2.38
RNU6-539P-201ENST00000516665 FAM90A27PA6NNH2 459 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 LINC00473A8K010 186 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 TARM1B6A8C7 271 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 ADAMTS3O15072 1205 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 TREHO43280 583 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 PEX1O43933 1283 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 JUNP05412 331 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 ITGAVP06756 1048 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 EPHX1P07099 455 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 SP1P08047 785 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 AOAHP28039 575 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 FOLR3P41439 243 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 KCNAB2Q13303 367 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 HABP4Q5JVS0 413 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 SNAP47Q5SQN1 464 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 DNAJC14Q6Y2X3 702 aaPredicted RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 RBM23Q86U06 439 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 KIAA0825Q8IV33 1275 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 LNX2Q8N448 690 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 RNF34Q969K3 372 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 GFM2Q969S9 779 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 PTCD3Q96EY7 689 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 EGFL8Q99944 293 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 CD244Q9BZW8 370 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 MTFR1LQ9H019 292 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 EPC1Q9H2F5 836 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF408Q9H9D4 720 aa0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 MRPL44Q9H9J2 332 aaKnown RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 ZNF214Q9UL59 606 aaPredicted RBP0.19□□□□□ -2.38
RNU6-539P-201ENST00000516665 PPM1BO75688 479 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 PRB2P02812 416 aaPredicted RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 MYF6P23409 242 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 RBM25P49756 843 aaKnown RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 SESN2P58004 480 aaPredicted RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 DSCR10P59022 87 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 KEAP1Q14145 624 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 TRIM25Q14258 630 aaKnown RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 KAZNQ674X7 775 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 SPINK14Q6IE38 97 aa0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 MEX3BQ6ZN04 569 aaKnown RBP0.18□□□□□ -2.38
RNU6-539P-201ENST00000516665 DOK3Q7L591 496 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms