RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 NID1P14543 1247 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 PPP1R2P41236 205 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 PLCD1P51178 756 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 MORC3Q14149 939 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 RNFT1Q5M7Z0 435 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 GPATCH4Q5T3I0 446 aaKnown RBP9.17□□□□□ -0.94
SFXN1-211ENST00000515736 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 MCTP2Q6DN12 878 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 FBXO46Q6PJ61 603 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-211ENST00000515736 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 CYB5D2Q8WUJ1 264 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 PPP1R14AQ96A00 147 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 ACDQ96AP0 544 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 ZDHHC15Q96MV8 337 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 NAP1L4Q99733 375 aaKnown RBP9.17□□□□□ -0.94
SFXN1-211ENST00000515736 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 ZMYND12Q9H0C1 365 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 CSRNP2Q9H175 543 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 DEFB129Q9H1M3 183 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 TTC12Q9H892 705 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-211ENST00000515736 SERPINB13Q9UIV8 391 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 STX8Q9UNK0 236 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 JAG2Q9Y219 1238 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 PCDHA5Q9Y5H7 936 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
SFXN1-211ENST00000515736 IGKV6D-41A0A0C4DH26 115 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 MANSC4A6NHS7 340 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 PRODHO43272 600 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 SLC26A4O43511 780 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 NMT2O60551 498 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 TTLL1O95922 423 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 CST3P01034 146 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 GRIA2P42262 883 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 SRSF11Q05519 484 aaKnown RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 PNOCQ13519 176 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 MAP7Q14244 749 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 TRIM61Q5EBN2 209 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 UBE3DQ7Z6J8 389 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 LRRC8AQ8IWT6 810 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 SPC24Q8NBT2 197 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 DYNLL2Q96FJ2 89 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 CCSER1Q9C0I3 900 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 ATXN3LQ9H3M9 355 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 RIOX1Q9H6W3 641 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 MTMR4Q9NYA4 1195 aa9.16□□□□□ -0.94
SFXN1-211ENST00000515736 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
SFXN1-211ENST00000515736 SPDYE3A6NKU9 549 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 KLRF2D3W0D1 207 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 STXBP3O00186 592 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 DYNC1I1O14576 645 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 PTGS1P23219 599 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
SFXN1-211ENST00000515736 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 SUPT20HL1Q3ZLR7 823 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 CFAP100Q494V2 611 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 DNTTIP2Q5QJE6 756 aaKnown RBP9.15□□□□□ -0.94
SFXN1-211ENST00000515736 PRAMEF13Q5VWM6 474 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 WWC2Q6AWC2 1192 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.94
SFXN1-211ENST00000515736 RAVER1Q8IY67 606 aaKnown RBP9.15□□□□□ -0.94
SFXN1-211ENST00000515736 CERS5Q8N5B7 392 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 BVESQ8NE79 360 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 ATL2Q8NHH9 583 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 DDX1Q92499 740 aaKnown RBP9.15□□□□□ -0.94
SFXN1-211ENST00000515736 CEP95Q96GE4 821 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 BTBD6Q96KE9 485 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 IDI2Q9BXS1 227 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 R3HDMLQ9H3Y0 253 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 MAN1B1Q9UKM7 699 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 ZNF451Q9Y4E5 1061 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 TRIM17Q9Y577 477 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 PCDHAC2Q9Y5I4 1007 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 PPP2R3BQ9Y5P8 575 aa9.15□□□□□ -0.94
SFXN1-211ENST00000515736 ATRNL1Q5VV63 1379 aa9.14□□□□□ -0.95
SFXN1-211ENST00000515736 LOXHD1Q8IVV2 1947 aa9.14□□□□□ -0.95
SFXN1-211ENST00000515736 TBX1O43435 398 aa9.14□□□□□ -0.95
SFXN1-211ENST00000515736 DNAJC8O75937 253 aaPredicted RBP9.14□□□□□ -0.95
SFXN1-211ENST00000515736 EYA4O95677 639 aa9.14□□□□□ -0.95
SFXN1-211ENST00000515736 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
SFXN1-211ENST00000515736 ZBTB48P10074 688 aaPredicted RBP9.14□□□□□ -0.95
SFXN1-211ENST00000515736 PDHBP11177 359 aa9.14□□□□□ -0.95
SFXN1-211ENST00000515736 SFPQP23246 707 aaKnown RBP eCLIP9.14□□□□□ -0.95
SFXN1-211ENST00000515736 NAPAP54920 295 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms