RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 CRELD2Q6UXH1 353 aaPredicted RBP18.34■□□□□ 0.53
AP3S1-208ENST00000515066 NECAB2Q7Z6G3 386 aa18.34■□□□□ 0.53
AP3S1-208ENST00000515066 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
AP3S1-208ENST00000515066 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
AP3S1-208ENST00000515066 NAP1L5Q96NT1 182 aaPredicted RBP18.34■□□□□ 0.53
AP3S1-208ENST00000515066 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
AP3S1-208ENST00000515066 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
AP3S1-208ENST00000515066 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
AP3S1-208ENST00000515066 PITPNM1O00562 1244 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 RPS6KA5O75582 802 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 GHRP10912 638 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 EPB41P11171 864 aaKnown RBP18.33■□□□□ 0.52
AP3S1-208ENST00000515066 FRMD5Q7Z6J6 570 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 ZBTB33Q86T24 672 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 CREBRFQ8IUR6 639 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 GPD1LQ8N335 351 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 CEP120Q8N960 986 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 RDH13Q8NBN7 331 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 TUBGCP2Q9BSJ2 902 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 TAB2Q9NYJ8 693 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 IFNKQ9P0W0 207 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 MAGEC2Q9UBF1 373 aaPredicted RBP18.33■□□□□ 0.52
AP3S1-208ENST00000515066 FRMD4BQ9Y2L6 1034 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 UMODL1Q5DID0 1318 aa18.33■□□□□ 0.52
AP3S1-208ENST00000515066 A0A1B0GTH6 734 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 KIAA0391O15091 583 aaKnown RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 MAPK13O15264 365 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 EXTL3O43909 919 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 TCHPQ9BT92 498 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 XPO4Q9C0E2 1151 aaKnown RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 ARMCX3Q9UH62 379 aaPredicted RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 ST3GAL5Q9UNP4 418 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
AP3S1-208ENST00000515066 SQORQ9Y6N5 450 aa18.32■□□□□ 0.52
AP3S1-208ENST00000515066 DCDC2CA8MYV0 355 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 TLR3O15455 904 aaKnown RBP18.31■□□□□ 0.52
AP3S1-208ENST00000515066 SERPINC1P01008 464 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
AP3S1-208ENST00000515066 SELPP16109 830 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 AXLP30530 894 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 MATR3P43243 847 aaKnown RBP eCLIP18.31■□□□□ 0.524e-6■■■■□ 23.6
AP3S1-208ENST00000515066 ACOT2P49753 483 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
AP3S1-208ENST00000515066 BFSP2Q13515 415 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 GPNMBQ14956 572 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 TMEM132AQ24JP5 1023 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 SEZ6Q53EL9 994 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 NOTUMQ6P988 496 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 LRRC8DQ7L1W4 858 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 PLEKHO2Q8TD55 490 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 FAM213AQ9BRX8 229 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 TBX21Q9UL17 535 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 N4BP3O15049 544 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 OGTO15294 1046 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 MCF2P10911 925 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 CD52P31358 61 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 TNFSF9P41273 254 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 MTIF2P46199 727 aaKnown RBP18.31■□□□□ 0.52
AP3S1-208ENST00000515066 WNT7BP56706 349 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 UBASH3AP57075 661 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 MAN2A1Q16706 1144 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 CCDC155Q8N6L0 562 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 SLC35C1Q96A29 364 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 VPS16Q9H269 839 aa18.31■□□□□ 0.52
AP3S1-208ENST00000515066 METTL14Q9HCE5 456 aaKnown RBP18.31■□□□□ 0.52
AP3S1-208ENST00000515066 ADCY5O95622 1261 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 LDHAP00338 332 aaKnown RBP18.3■□□□□ 0.52
AP3S1-208ENST00000515066 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
AP3S1-208ENST00000515066 ZNF75DP51815 510 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 BFSP1Q12934 665 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 C1orf220Q5T0J3 134 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 UBXN11Q5T124 520 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 SLC27A1Q6PCB7 646 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 TMEM192Q8IY95 271 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 USP38Q8NB14 1042 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 ANKRD20A12PQ8NF67 263 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 MFSD14AQ96MC6 490 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 EIF2AQ9BY44 585 aaKnown RBP18.3■□□□□ 0.52
AP3S1-208ENST00000515066 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 TMX1Q9H3N1 280 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 RTN4Q9NQC3 1192 aaKnown RBP18.3■□□□□ 0.52
AP3S1-208ENST00000515066 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
AP3S1-208ENST00000515066 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
AP3S1-208ENST00000515066 LGALS16A8MUM7 142 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 GPR182O15218 404 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
AP3S1-208ENST00000515066 TEX33O43247 280 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 DLG4P78352 724 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 CYP24A1Q07973 514 aa18.29■□□□□ 0.52
AP3S1-208ENST00000515066 NCBP1Q09161 790 aaKnown RBP18.29■□□□□ 0.52
AP3S1-208ENST00000515066 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
AP3S1-208ENST00000515066 NR1I3Q14994 352 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms