RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RAB27AP51159 221 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 PMS1P54277 932 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 CCL23P55773 120 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 FAM189BP81408 668 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 ENPEPQ07075 957 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 CNKSR3Q6P9H4 555 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 SCLYQ96I15 445 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 CEP63Q96MT8 703 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 ADPGKQ9BRR6 497 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 MKNK1Q9BUB5 465 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 TSPY26PQ9H489 355 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
PDLIM5-220ENST00000514830 OGTO15294 1046 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 EFCAB14O75071 495 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 BMP8BP34820 402 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 ZNF165P49910 485 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 NFX1Q12986 1120 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 PPIGQ13427 754 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 KLHL10Q6JEL2 608 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 XXYLT1Q8NBI6 393 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 DBF4BQ8NFT6 615 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 CDT1Q9H211 546 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 HSPBP1Q9NZL4 362 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 CUL9Q8IWT3 2517 aa13.08□□□□□ -0.32
PDLIM5-220ENST00000514830 A0A0U1RQF3 1178 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 TRIM49BA6NDI0 452 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 TISP43B9A030 160 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 C9IYK1 514 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 EXTL3O43909 919 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 MGEA5O60502 916 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 ADRB2P07550 413 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 CSF2RAP15509 400 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 NR2F2P24468 414 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 GRM5P41594 1212 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 MARSP56192 900 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 MYL5Q02045 173 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 FPGSQ05932 587 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 NCAPHQ15003 741 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 IQCB1Q15051 598 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 ZNF568Q3ZCX4 644 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 RTN4RL1Q86UN2 441 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 RSPH1Q8WYR4 309 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 MSTO1Q9BUK6 570 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
PDLIM5-220ENST00000514830 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 CETN3O15182 167 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 GNA14O95837 355 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 EOMESO95936 686 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 CLTAP09496 248 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 ADAM9Q13443 819 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 IKBKEQ14164 716 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 TMEM132AQ24JP5 1023 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 TWF2Q6IBS0 349 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 CRELD2Q6UXH1 353 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 CRIPAKQ8N1N5 446 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 GPD1LQ8N335 351 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 BADQ92934 168 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 TSPAN18Q96SJ8 248 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 ADAM2Q99965 735 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 FAM105AQ9NUU6 356 aa13.06□□□□□ -0.32
PDLIM5-220ENST00000514830 ANKFY1Q9P2R3 1169 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms