RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 TYW1Q9NV66 732 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
UBE2D3-232ENST00000514755 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 GRM6O15303 877 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 HIP1RO75146 1068 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 ERLIN2O94905 339 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 F13A1P00488 732 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SSBP05455 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 ZSCAN22P10073 491 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 PBX3P40426 434 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 RPIAP49247 311 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SLC12A3P55017 1021 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 MAPK7Q13164 816 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 CAMK1Q14012 370 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 AGMOQ6ZNB7 445 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 CHAMP1Q96JM3 812 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 AK8Q96MA6 479 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SAMD11Q96NU1 681 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 TMEM117Q9H0C3 514 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-232ENST00000514755 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 ZNF623O75123 536 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 EOMESO95936 686 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 ITGB1P05556 798 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 LIG1P18858 919 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 PLCG1P19174 1290 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 DNAJB1P25685 340 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 UBA7P41226 1012 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 NAMPTP43490 491 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 SLC39A14Q15043 492 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 KLHL23Q8NBE8 558 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 LINC00301Q8NCQ3 95 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 CCDC113Q9H0I3 377 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 FZD8Q9H461 694 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 ZDHHC9Q9Y397 364 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 HES2Q9Y543 173 aa12.17□□□□□ -0.46
UBE2D3-232ENST00000514755 PRUNE2Q8WUY3 3088 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 B4GALT3O60512 393 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 OFD1O75665 1012 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 RB1P06400 928 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 NPTX2P47972 431 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 PEX3P56589 373 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 DHX8Q14562 1220 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 TAS1R3Q7RTX0 852 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 ABI1Q8IZP0 508 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 SLC17A8Q8NDX2 589 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 KIFAP3Q92845 792 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 CCSER1Q9C0I3 900 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 RWDD3Q9Y3V2 267 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 IPPQ9Y573 584 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
UBE2D3-232ENST00000514755 REV3LO60673 3130 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 A0A087X0B3 334 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NT5C1B-RDH14C9J2C7 533 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NPTXRO95502 500 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PRKCBP05771 671 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 AXLP30530 894 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 IRS1P35568 1242 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 RAB27AP51159 221 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 STK38Q15208 465 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.469e-7■□□□□ 10.8
UBE2D3-232ENST00000514755 FAM187BQ17R55 369 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 EEF1DP3Q658K8 133 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NOTUMQ6P988 496 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.464e-11■□□□□ 10.1
UBE2D3-232ENST00000514755 LRRC43Q8N309 656 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 RAD54LQ92698 747 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 P2RX5Q93086 422 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms