RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 BICD1Q96G01 975 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GAD1Q99259 594 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 MRPL9Q9BYD2 267 aaKnown RBP15.31■□□□□ 0.04
USP46-209ENST00000514536 BLZF1Q9H2G9 400 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
USP46-209ENST00000514536 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 TBC1D13Q9NVG8 400 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 MIOSQ9NXC5 875 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 SEL1LQ9UBV2 794 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 ARL5CA6NH57 179 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 POMCP01189 267 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 SCP2P22307 547 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
USP46-209ENST00000514536 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 ZNF568Q3ZCX4 644 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
USP46-209ENST00000514536 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP46-209ENST00000514536 KLHL23Q8NBE8 558 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 COLGALT1Q8NBJ5 622 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 URGCPQ8TCY9 931 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 KCNN1Q92952 543 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 CDT1Q9H211 546 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 USP25Q9UHP3 1055 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 PCDHB12Q9Y5F1 795 aa15.3■□□□□ 0.04
USP46-209ENST00000514536 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 HARSP12081 509 aaKnown RBP15.29■□□□□ 0.04
USP46-209ENST00000514536 LAG3P18627 525 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 PROZP22891 400 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 MLH1P40692 756 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 COASYQ13057 564 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 CUL4BQ13620 913 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 ZPBP2Q6X784 338 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
USP46-209ENST00000514536 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
USP46-209ENST00000514536 NRDE2Q9H7Z3 1164 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 PLAGL2Q9UPG8 496 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 TCHHQ07283 1943 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 CHD9Q3L8U1 2897 aa15.29■□□□□ 0.04
USP46-209ENST00000514536 ABLIM1O14639 778 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 TOM1L1O75674 476 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ZNF202O95125 648 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 GCNT3O95395 438 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MCF2P10911 925 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ABCD1P33897 745 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 PBX3P40426 434 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MATR3P43243 847 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP46-209ENST00000514536 LIG4P49917 911 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 SCNN1GP51170 649 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 OSTNP61366 133 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 KCNT2Q6UVM3 1135 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 THNSL1Q8IYQ7 743 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 CEP120Q8N960 986 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 P2RX5Q93086 422 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ZNF558Q96NG5 402 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 FAM193BQ96PV7 902 aaPredicted RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 STRA6Q9BX79 667 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ALG13Q9NP73 1137 aaKnown RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 OLFML3Q9NRN5 406 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MTCH2Q9Y6C9 303 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 NT5C1B-RDH14C9J2C7 533 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 HNRNPDLO14979 420 aaKnown RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 GRM6O15303 877 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 INPPL1O15357 1258 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 CLDN3O15551 220 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP46-209ENST00000514536 RECQL4O94761 1208 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 DDHD2O94830 711 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 ITGB1P05556 798 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MYBP10242 640 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 POU3F3P20264 500 aaPredicted RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 GRM5P41594 1212 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 CASP5P51878 434 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 BCAR1P56945 870 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MAP4K3Q8IVH8 894 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 GSTCDQ8NEC7 633 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 MAFAQ8NHW3 353 aaPredicted RBP15.28■□□□□ 0.04
USP46-209ENST00000514536 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
USP46-209ENST00000514536 DNAJB4Q9UDY4 337 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms