RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CCT2P78371 535 aaKnown RBP22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 CSTF1Q05048 431 aaKnown RBP22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 UBXN2BQ14CS0 331 aa22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 USP41Q3LFD5 358 aa22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 PRSS55Q6UWB4 352 aaPredicted RBP22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 SLKQ9H2G2 1235 aaPredicted RBP22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 PCDHA4Q9UN74 947 aa22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 MTCL1Q9Y4B5 1905 aaKnown RBP22.68■■□□□ 1.22
SQSTM1-215ENST00000514093 DOCK6Q96HP0 2047 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 NID2Q14112 1375 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 LAMTOR5O43504 91 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 SLC37A4O43826 429 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 TSPAN1O60635 241 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 IFNAR1P17181 557 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 CD72P21854 359 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 JAKMIP1Q96N16 626 aaKnown RBP22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 MBOAT7Q96N66 472 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 BCO2Q9BYV7 579 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 SH3GLB2Q9NR46 395 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 FNIP2Q9P278 1114 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 CACNG4Q9UBN1 327 aa22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 DDX25Q9UHL0 483 aaKnown RBP22.67■■□□□ 1.22
SQSTM1-215ENST00000514093 AKAP5P24588 427 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 SLC44A4Q53GD3 710 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 FERMT3Q86UX7 667 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 C22orf23Q9BZE7 217 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 NXF3Q9H4D5 531 aaKnown RBP22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 ADAM28Q9UKQ2 775 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 CDH7Q9ULB5 785 aa22.66■■□□□ 1.22
SQSTM1-215ENST00000514093 FAM170BA6NMN3 283 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 ZBTB39O15060 712 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 RFC5P40937 340 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 ATXN1P54253 815 aaKnown RBP22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 EMC2Q15006 297 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 MLF2Q15773 248 aaPredicted RBP22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 NOTUMQ6P988 496 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 CDR2LQ86X02 465 aaPredicted RBP22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 BLIDQ8IZY5 108 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 GSTCDQ8NEC7 633 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 DDX23Q9BUQ8 820 aaKnown RBP22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 CSRNP2Q9H175 543 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 KLK14Q9P0G3 267 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 VAV3Q9UKW4 847 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 ZFP37Q9Y6Q3 630 aaPredicted RBP22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 EPG5Q9HCE0 2579 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 MYH15Q9Y2K3 1946 aa22.65■■□□□ 1.22
SQSTM1-215ENST00000514093 INO80B-WBP1J3KQ70 363 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 M0R2N6 131 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 TADA2AO75478 443 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 C1RP00736 705 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 P4HBP07237 508 aaKnown RBP22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 INF2Q27J81 1249 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 ZNF528Q3MIS6 628 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 RTP2Q5QGT7 225 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 BLOC1S2Q6QNY1 142 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 EXOC8Q8IYI6 725 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 ITFG1Q8TB96 612 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 ATRIPQ8WXE1 791 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 FGF13Q92913 245 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 TRIM6Q9C030 488 aaPredicted RBP22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 FBXO4Q9UKT5 387 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 POLIQ9UNA4 740 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 GIT1Q9Y2X7 761 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 TDRD15B5MCY1 1934 aaKnown RBP22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 MIA3Q5JRA6 1907 aa22.64■■□□□ 1.21
SQSTM1-215ENST00000514093 CCL16O15467 120 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 ASAP2O43150 1006 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 AXLP30530 894 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 YWHABP31946 246 aaKnown RBP22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 PPP2R5CQ13362 524 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 XKR9Q5GH70 373 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 TSSK4Q6SA08 328 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 HASPINQ8TF76 798 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 TCP11Q8WWU5 503 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 KXD1Q9BQD3 176 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 PAAF1Q9BRP4 392 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 RGL1Q9NZL6 768 aa22.63■■□□□ 1.21
SQSTM1-215ENST00000514093 SPTLC1O15269 473 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 DKC1O60832 514 aaKnown RBP eCLIP22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 PDIA3P30101 505 aaKnown RBP22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 PTENP60484 403 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 PRKCQQ04759 706 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 NCBP1Q09161 790 aaKnown RBP22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 PPM1LQ5SGD2 360 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 MOXD1Q6UVY6 613 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 CCDC51Q96ER9 411 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 MTRQ99707 1265 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 CLSTN3Q9BQT9 956 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 LXNQ9BS40 222 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 LTB4R2Q9NPC1 389 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 FBXW11Q9UKB1 542 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 PCDHGA2Q9Y5H1 932 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 SPTBN2O15020 2390 aa22.62■■□□□ 1.21
SQSTM1-215ENST00000514093 TPRP12270 2363 aaKnown RBP22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 DCDC2BA2VCK2 349 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 C8AP07357 584 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 ARF4P18085 180 aaPredicted RBP22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 CTTNQ14247 550 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms