RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 IRAK4Q9NWZ3 460 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 F8VZ95 297 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ENO1P06733 434 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 NOP14P78316 857 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 FAM196AQ6ZSG2 479 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ERICH1Q86X53 443 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 FUKQ8N0W3 1084 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 C3orf20Q8ND61 904 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SLC26A7Q8TE54 656 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 PCSK1NQ9UHG2 260 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 KCNG1Q9UIX4 513 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ABCB11O95342 1321 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 WDR64B1ANS9 1081 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SLC16A3O15427 465 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 EYA4O95677 639 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 P4HA1P13674 534 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ITIH2P19823 946 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 KCNA3P22001 575 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 KLRK1P26718 216 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ECE1P42892 770 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 CASP4P49662 377 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SNX16P57768 344 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 AP2B1P63010 937 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 RPS6KA2Q15349 733 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 RHOT1Q8IXI2 618 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SLC17A8Q8NDX2 589 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ACTRT1Q8TDG2 376 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 CPA5Q8WXQ8 436 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ATP6V0A1Q93050 837 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 GDF3Q9NR23 364 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 HAO1Q9UJM8 370 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 COILP38432 576 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 GARSP41250 739 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 RHPN2Q8IUC4 686 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 WDR75Q8IWA0 830 aaKnown RBP8.25□□□□□ -1.09
CLCN3-209ENST00000513761 ZBTB8OSQ8IWT0 167 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 MORC4Q8TE76 937 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 LRGUKQ96M69 825 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 CARD9Q9H257 536 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 HSD3B7Q9H2F3 369 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 MTMR4Q9NYA4 1195 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 SSX2IPQ9Y2D8 614 aa8.25□□□□□ -1.09
CLCN3-209ENST00000513761 A6NJR5 290 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 EPHB6O15197 1021 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ZWINTO95229 277 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 CTCFP49711 727 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ALCAMQ13740 583 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ITIH4Q14624 930 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 KLHL38Q2WGJ6 581 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 KRT39Q6A163 491 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 CLTCQ00610 1675 aaKnown RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 DENND3A2RUS2 1198 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 RSPH10B2B2RC85 870 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 F5H423 210 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ZBED1O96006 694 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 SERPINB2P05120 415 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 RSPH10BP0C881 870 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 UBTFL6P0CB48 400 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 VEGFAP15692 232 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ALDH1B1P30837 517 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ATG4AQ8WYN0 398 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 RIOK1Q9BRS2 568 aaKnown RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 TMEM117Q9H0C3 514 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 MARCOQ9UEW3 520 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ANXA13P27216 316 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 CPA2P48052 419 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 IFI35P80217 286 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 KRT80Q6KB66 452 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 CCNYQ8ND76 341 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 JDP2Q8WYK2 163 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 FAM81BQ96LP2 452 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 SLIT1O75093 1534 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 F5H6K3 240 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 WNT7AO00755 349 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 GPC4O75487 556 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 KLRC3Q07444 240 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 MIGA2Q7L4E1 593 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 TEX2Q8IWB9 1127 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 DCAF4Q8WV16 495 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ROPN1BQ9BZX4 212 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 ROPN1Q9HAT0 212 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 PFDN4Q9NQP4 134 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 APOBEC2Q9Y235 224 aaKnown RBP8.24□□□□□ -1.09
CLCN3-209ENST00000513761 HEY1Q9Y5J3 304 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 H0YIN7 160 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 OPLAHO14841 1288 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 CYP11B2P19099 503 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 HIF1AQ16665 826 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 OR6B2Q6IFH4 312 aa8.24□□□□□ -1.09
CLCN3-209ENST00000513761 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms