RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
PTPN20-227ENST00000513159 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
PTPN20-227ENST00000513159 SCN1AP35498 2009 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 A0A0B4J269 797 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 H0YCG3 227 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 N4BP3O15049 544 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 B4GALT3O60512 393 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 TOM1L1O75674 476 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 DGKIO75912 1065 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
PTPN20-227ENST00000513159 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-227ENST00000513159 SCP2P22307 547 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 PRCPP42785 496 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 MCL1Q07820 350 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 STRN3Q13033 797 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-227ENST00000513159 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 FAM43BQ6ZT52 329 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-227ENST00000513159 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 NPAS4Q8IUM7 802 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 SMARCE1Q969G3 411 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 CCDC51Q96ER9 411 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 ACCSQ96QU6 501 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 MED15Q96RN5 788 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 SLC9A7Q96T83 725 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 MIOSQ9NXC5 875 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 PLXNA4Q9HCM2 1894 aa11.33□□□□□ -0.6
PTPN20-227ENST00000513159 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 BIN1O00499 593 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
PTPN20-227ENST00000513159 OFD1O75665 1012 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 AMHP03971 560 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 AKAP5P24588 427 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 TNFSF9P41273 254 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 KCNJ6P48051 423 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 WNT7BP56706 349 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 ALCAMQ13740 583 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 ZNF658Q5TYW1 1059 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-227ENST00000513159 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-227ENST00000513159 CASD1Q96PB1 797 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 CBWD1Q9BRT8 395 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 PLAGL2Q9UPG8 496 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 UBE4BO95155 1302 aa11.32□□□□□ -0.6
PTPN20-227ENST00000513159 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 PTGESO14684 152 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 INPPL1O15357 1258 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 RECQL4O94761 1208 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 SMC2O95347 1197 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 EOMESO95936 686 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 MBD3O95983 291 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 MCF2P10911 925 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 GRM5P41594 1212 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 LIG4P49917 911 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 RAB27AP51159 221 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 NAB2Q15742 525 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 ALKAL1Q6UXT8 129 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 GUF1Q8N442 669 aaKnown RBP11.31□□□□□ -0.6
PTPN20-227ENST00000513159 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 BICD1Q96G01 975 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 PCDHB7Q9Y5E2 793 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
PTPN20-227ENST00000513159 PRRC2BQ5JSZ5 2229 aaKnown RBP11.3□□□□□ -0.6
PTPN20-227ENST00000513159 CLIC2O15247 247 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 CLDN3O15551 220 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 ADRB2P07550 413 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
PTPN20-227ENST00000513159 HARSP12081 509 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms