RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HSPBP1Q9NZL4 362 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
PDPN-210ENST00000513143 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
PDPN-210ENST00000513143 CXCL10P02778 98 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 MCF2P10911 925 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 RFC2P35250 354 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 CCL23P55773 120 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 NOLC1Q14978 699 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDPN-210ENST00000513143 TPD52L1Q16890 204 aaPredicted RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 ZNF568Q3ZCX4 644 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 PLEKHG4Q58EX7 1191 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 XXYLT1Q8NBI6 393 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 EEF2KMTQ96G04 330 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 SCLYQ96I15 445 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 ADPGKQ9BRR6 497 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 MSTO1Q9BUK6 570 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 CDT1Q9H211 546 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 HSD3B7Q9H2F3 369 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 FANCLQ9NW38 375 aa13.68□□□□□ -0.22
PDPN-210ENST00000513143 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
PDPN-210ENST00000513143 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 OGTO15294 1046 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 FAM189A1O60320 539 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 EXOC3O60645 756 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
PDPN-210ENST00000513143 RAG1P15918 1043 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 ZNF18P17022 549 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 ITGB8P26012 769 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDPN-210ENST00000513143 CASP4P49662 377 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 CYP2J2P51589 502 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 DSC3Q14574 896 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 DCAF4L1Q3SXM0 396 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 UBXN11Q5T124 520 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
PDPN-210ENST00000513143 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 IRF2BP1Q8IU81 584 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 GPD1LQ8N335 351 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 ZSWIM2Q8NEG5 633 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 MKNK1Q9BUB5 465 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 KIAA1586Q9HCI6 787 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 CITO14578 2027 aa13.67□□□□□ -0.22
PDPN-210ENST00000513143 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 MAPK13O15264 365 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 SLC16A3O15427 465 aaKnown RBP13.66□□□□□ -0.22
PDPN-210ENST00000513143 EXTL3O43909 919 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 AKAP3O75969 853 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 GNA14O95837 355 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 ZSCAN20P17040 1043 aaPredicted RBP13.66□□□□□ -0.22
PDPN-210ENST00000513143 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
PDPN-210ENST00000513143 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
PDPN-210ENST00000513143 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 CRELD2Q6UXH1 353 aaPredicted RBP13.66□□□□□ -0.22
PDPN-210ENST00000513143 FAM114A1Q8IWE2 563 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 SEPT8Q92599 483 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 APBB2Q92870 758 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 SAAL1Q96ER3 474 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 TRIP11Q15643 1979 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 MICAL3Q7RTP6 2002 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 ANK1P16157 1881 aa13.66□□□□□ -0.22
PDPN-210ENST00000513143 GOLGA8IPA6NC78 632 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 GOLGA8JA6NMD2 632 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 EVI5O60447 810 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 MGEA5O60502 916 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 NPTXRO95502 500 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 TPM4P67936 248 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 POU5F1Q01860 360 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 KYAT1Q16773 422 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 TWF2Q6IBS0 349 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 C7orf61Q8IZ16 206 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 TMEM199Q8N511 208 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 VWCEQ96DN2 955 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 BORCS6Q96GS4 357 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 ADAM2Q99965 735 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 EIF2AQ9BY44 585 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
PDPN-210ENST00000513143 CPSF3Q9UKF6 684 aaKnown RBP13.65□□□□□ -0.22
PDPN-210ENST00000513143 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms