RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ABI2Q9NYB9 513 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 SRP68Q9UHB9 627 aaKnown RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 RIMKLBQ9ULI2 386 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PIAS3Q9Y6X2 628 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PLEKHH2Q8IVE3 1493 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 SYCP2Q9BX26 1530 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 A8MVJ9 347 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCP110O43303 1012 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 EEF2P13639 858 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 PLCG2P16885 1265 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 YBX3P16989 372 aaKnown RBP eCLIP6.87□□□□□ -1.313e-7■■□□□ 12.8
TRAPPC11-209ENST00000512476 ALDH3A2P51648 485 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCR9P51686 369 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CACNB3P54284 484 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 PPP4R3BQ5MIZ7 849 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 SULT6B1Q6IMI4 303 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 KLHDC10Q6PID8 442 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 RALYLQ86SE5 291 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 HERC6Q8IVU3 1022 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 BRF1Q92994 677 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CHFRQ96EP1 664 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 USP44Q9H0E7 712 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 SEPT11Q9NVA2 429 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADGRE2Q9UHX3 823 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZNF214Q9UL59 606 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 AP1M2Q9Y6Q5 423 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 NCOA1Q15788 1441 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCDC141Q6ZP82 1450 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 GOLGA8AA7E2F4 631 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 NT5C1B-RDH14C9J2C7 533 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CDK2AP1O14519 115 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 GAS7O60861 476 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 CHGBP05060 677 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 SNRPA1P09661 255 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 NME1P15531 152 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 LSSP48449 732 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 HNRNPMP52272 730 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 AGFG1P52594 562 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 PGS1Q32NB8 556 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 C9orf84Q5VXU9 1444 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 USP45Q70EL2 814 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 KRT74Q7RTS7 529 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 USP38Q8NB14 1042 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 STT3BQ8TCJ2 826 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 EYA3Q99504 573 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 C1QTNF2Q9BXJ5 285 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 EDEM3Q9BZQ6 932 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZMAT3Q9HA38 289 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 TCF7L2Q9NQB0 619 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 TMEM160Q9NX00 188 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 TBC1D7Q9P0N9 293 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 GPN3Q9UHW5 284 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 KIAA1107Q9UPP5 1409 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 BACE2Q9Y5Z0 518 aa6.87□□□□□ -1.31
TRAPPC11-209ENST00000512476 MYO1BO43795 1136 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 PIAS2O75928 621 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 HNRNPA1P09651 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 PDHBP11177 359 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAPK3P27361 379 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 SERPINF1P36955 418 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 RABIFP47224 123 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 TLE2Q04725 743 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADIPOQQ15848 244 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 IYDQ6PHW0 289 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 KCNT2Q6UVM3 1135 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 SPATA2LQ8IUW3 424 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCNJLQ8IV13 435 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 PDCL2Q8N4E4 241 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 STYXQ8WUJ0 223 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 PTPRN2Q92932 1015 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 VPS39Q96JC1 886 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 CGRRF1Q99675 332 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 ORAI3Q9BRQ5 295 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 TBCCD1Q9NVR7 557 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 MOSPD1Q9UJG1 213 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 ABCC1P33527 1531 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 AGAP14A8MT82 685 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 F5H0A9 414 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 LILRA1O75019 489 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 USP1O94782 785 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 IFNB1P01574 187 aa6.86□□□□□ -1.31
TRAPPC11-209ENST00000512476 MYF5P13349 255 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms