RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 KCNT2Q6UVM3 1135 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 MRPL43Q8N983 215 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 AUTS2Q8WXX7 1259 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 DHX58Q96C10 678 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 RIT2Q99578 217 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 CELF4Q9BZC1 486 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 CBX8Q9HC52 389 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 RMND1Q9NWS8 449 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 GINS2Q9Y248 185 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 SIT1Q9Y3P8 196 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 UBIAD1Q9Y5Z9 338 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 SQORQ9Y6N5 450 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 IGSF9BQ9UPX0 1349 aa11.6□□□□□ -0.55
PDLIM5-217ENST00000512274 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 PRR5-ARHGAP8B1AHC4 643 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 SPATA31C2B4DYI2 1134 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 MSH4O15457 936 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 LRRN2O75325 713 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 PSMD10O75832 226 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 RPA1P27694 616 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 PPP1R2P41236 205 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 STAT6P42226 847 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 TXKP42681 527 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 ARHGAP8P85298 464 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 PNOCQ13519 176 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 LRRC55Q6ZSA7 311 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 CCDC149Q6ZUS6 474 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 OTOP3Q7RTS5 596 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 TRAPPC12Q8WVT3 735 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 GLG1Q92896 1179 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 ZNF558Q96NG5 402 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 MTRQ99707 1265 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 C7orf25Q9BPX7 421 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 SPG21Q9NZD8 308 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 WNT16Q9UBV4 365 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
PDLIM5-217ENST00000512274 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.55
PDLIM5-217ENST00000512274 PVALEFA0A1B0GWK0 134 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 NT5C1B-RDH14C9J2C7 533 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 INSRRP14616 1297 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 LMNB2Q03252 620 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 DMWDQ09019 674 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 KARSQ15046 597 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 HS1BP3Q53T59 392 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 PRR16Q569H4 304 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 GPR161Q8N6U8 529 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 PDILTQ8N807 584 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 RDM1Q8NG50 284 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 ERMNQ8TAM6 284 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 PPP1R16BQ96T49 567 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 FOXQ1Q9C009 403 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 DNAJC25Q9H1X3 360 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 BLOC1S4Q9NUP1 217 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 DLGAP2Q9P1A6 1054 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 MAN1B1Q9UKM7 699 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 NOC2LQ9Y3T9 749 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 ZNF292O60281 2723 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 CACNA1IQ9P0X4 2223 aa11.58□□□□□ -0.56
PDLIM5-217ENST00000512274 CEP250Q9BV73 2442 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 CFAP47Q6ZTR5 3102 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 ACACBO00763 2458 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 C9IYK1 514 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 RPS6KA5O75582 802 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 RHOBTB3O94955 611 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 GLULP15104 373 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 PLCG1P19174 1290 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 BMP6P22004 513 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 KRT76Q01546 638 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 SLC24A5Q71RS6 500 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 DHX40Q8IX18 779 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 MAML2Q8IZL2 1156 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 ST13P5Q8NFI4 369 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 GPR152Q8TDT2 470 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 SNX29Q8TEQ0 813 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 CDHR1Q96JP9 859 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 CASD1Q96PB1 797 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 PNMA5Q96PV4 448 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 TRIM9Q9C026 710 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
PDLIM5-217ENST00000512274 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms