RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 KRT79Q5XKE5 535 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 DAW1Q8N136 415 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 SLC22A17Q8WUG5 538 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 CASP10Q92851 521 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
CHFR-208ENST00000511001 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
CHFR-208ENST00000511001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.3□□□□□ -0.28
CHFR-208ENST00000511001 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 F8W810 466 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 ACKR2O00590 384 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 N4BP3O15049 544 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 HOXB8P17481 243 aaPredicted RBP13.3□□□□□ -0.28
CHFR-208ENST00000511001 CBX2Q14781 532 aaPredicted RBP13.3□□□□□ -0.28
CHFR-208ENST00000511001 PPP2R5AQ15172 486 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 MAPK6Q16659 721 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 NT5DC1Q5TFE4 455 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 RINT1Q6NUQ1 792 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 TAS1R1Q7RTX1 841 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
CHFR-208ENST00000511001 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 HERC2P3Q9BVR0 1158 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
CHFR-208ENST00000511001 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 CXCL16Q9H2A7 254 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 KLK14Q9P0G3 267 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 DNM3Q9UQ16 869 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 ZNF318Q5VUA4 2279 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
CHFR-208ENST00000511001 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 DCXO43602 365 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 SRGAP2BP0DMP2 458 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 EPCAMP16422 314 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 CA8P35219 290 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 OR1G1P47890 313 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 PRPF4BQ13523 1007 aaKnown RBP13.29□□□□□ -0.28
CHFR-208ENST00000511001 GIT2Q14161 759 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
CHFR-208ENST00000511001 TAS1R3Q7RTX0 852 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 KLHL5Q96PQ7 755 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 SNTG2Q9NY99 539 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 PARP2Q9UGN5 583 aa13.29□□□□□ -0.28
CHFR-208ENST00000511001 VWA3AA6NCI4 1184 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 PTGESO14684 152 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 HIP1RO75146 1068 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 RECQL4O94761 1208 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 SOD2P04179 222 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 SSBP05455 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHFR-208ENST00000511001 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
CHFR-208ENST00000511001 ALADP13716 330 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 LIG1P18858 919 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 NPTX2P47972 431 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 PEX3P56589 373 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 GRIK3Q13003 919 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 TMEM119Q4V9L6 283 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
CHFR-208ENST00000511001 KANK3Q6NY19 840 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 C12orf76Q8N812 135 aaPredicted RBP13.28□□□□□ -0.28
CHFR-208ENST00000511001 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 ARHGAP28Q9P2N2 729 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 CACNG4Q9UBN1 327 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
CHFR-208ENST00000511001 DOCK8Q8NF50 2099 aa13.27□□□□□ -0.28
CHFR-208ENST00000511001 PRR33A8MZF0 331 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 EFNA5P52803 228 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 GRIN1Q05586 938 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 NAB2Q15742 525 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 HERC4Q5GLZ8 1057 aaPredicted RBP13.27□□□□□ -0.29
CHFR-208ENST00000511001 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
CHFR-208ENST00000511001 RABGGTAQ92696 567 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 RPS6KC1Q96S38 1066 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 PLIN2Q99541 437 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 ADAM7Q9H2U9 754 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 TMEM134Q9H6X4 195 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 STK39Q9UEW8 545 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 TRIOO75962 3097 aa13.27□□□□□ -0.29
CHFR-208ENST00000511001 WDFY4Q6ZS81 3184 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 K7ERI5 159 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 CLCN4P51793 760 aa13.26□□□□□ -0.29
CHFR-208ENST00000511001 SLC12A3P55017 1021 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms