RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LNX1Q8TBB1 728 aaPredicted RBP15.9■□□□□ 0.14
USP38-202ENST00000510377 CCHCR1Q8TD31 782 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 PI4K2AQ9BTU6 479 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 CDC42EP4Q9H3Q1 356 aaKnown RBP15.9■□□□□ 0.14
USP38-202ENST00000510377 CPSF2Q9P2I0 782 aaKnown RBP15.9■□□□□ 0.14
USP38-202ENST00000510377 MAPK13O15264 365 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 TMEM179Q6ZVK1 233 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 CFAP61Q8NHU2 1237 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 SNF8Q96H20 258 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 ERVK-5Q9HDB9 667 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 CTNNAL1Q9UBT7 734 aa15.9■□□□□ 0.14
USP38-202ENST00000510377 TISP43B9A030 160 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 MYBL1P10243 752 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 EP400NLQ6ZTU2 488 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 NIM1KQ8IY84 436 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 COA1Q9GZY4 146 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 DDX4Q9NQI0 724 aaKnown RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 SPATS2LQ9NUQ6 558 aaKnown RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 FOXO6A8MYZ6 492 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 DRD4P21917 467 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 YWHAGP61981 247 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP38-202ENST00000510377 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 ASTE1Q2TB18 679 aaPredicted RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 HAUS6Q7Z4H7 955 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 NLRX1Q86UT6 975 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 ATP8B4Q8TF62 1192 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 KAT5Q92993 513 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 CFAP57Q96MR6 1250 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 MAK16Q9BXY0 300 aaKnown RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 KCTD10Q9H3F6 313 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 LRRIQ4A6NIV6 560 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 EML1O00423 815 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 TXNDC9O14530 226 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 PYGMP11217 842 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 NQO1P15559 274 aaKnown RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 CEP170P1Q96L14 293 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 KLF6Q99612 283 aaPredicted RBP15.89■□□□□ 0.13
USP38-202ENST00000510377 CBWD1Q9BRT8 395 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 ADAM22Q9P0K1 906 aa15.89■□□□□ 0.13
USP38-202ENST00000510377 RASA3Q14644 834 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 BRDTQ58F21 947 aaPredicted RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 SYCP2LQ5T4T6 812 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 ANKMY2Q8IV38 441 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 PDCD7Q8N8D1 485 aaKnown RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 BBOF1Q8ND07 529 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 ALG3Q92685 438 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 CIB2O75838 187 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 KRT19P08727 400 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 MAN1A1P33908 653 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 SLC12A3P55017 1021 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 ELF3P78545 371 aaPredicted RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 ARSHQ5FYA8 562 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 YTHDF3Q7Z739 585 aaKnown RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 FAM213AQ9BRX8 229 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 KIFC3Q9BVG8 833 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 TMEM117Q9H0C3 514 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 KDM4CQ9H3R0 1056 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 POLLQ9UGP5 575 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 LUC7L3O95232 432 aaKnown RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 CALCAP01258 141 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 KCNJ2P63252 427 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 GPS1Q13098 491 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 TRPC3Q13507 836 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 CEP128Q6ZU80 1094 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 VCXQ9H320 206 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 RGPD5Q99666 1765 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 PFASO15067 1338 aa15.88■□□□□ 0.13
USP38-202ENST00000510377 ZC3H4Q9UPT8 1303 aaKnown RBP15.88■□□□□ 0.13
USP38-202ENST00000510377 M0R2N6 131 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 ANXA13P27216 316 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 POLE2P56282 527 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 BASP1P80723 227 aaKnown RBP15.87■□□□□ 0.13
USP38-202ENST00000510377 PTF1AQ7RTS3 328 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 COL23A1Q86Y22 540 aaPredicted RBP15.87■□□□□ 0.13
USP38-202ENST00000510377 ZBED8Q8IZ13 594 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 PIK3R5Q8WYR1 880 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 RBM15Q96T37 977 aaKnown RBP eCLIP15.87■□□□□ 0.133e-6■■□□□ 11.8
USP38-202ENST00000510377 OSBPL1AQ9BXW6 950 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 GINM1Q9NU53 330 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 RBAK-RBAKDNI3L0D1 243 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 TARSP26639 723 aaKnown RBP15.87■□□□□ 0.13
USP38-202ENST00000510377 COPS2P61201 443 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 TTC17Q96AE7 1141 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 C21orf2O43822 256 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 PPP1R11O60927 126 aaPredicted RBP15.87■□□□□ 0.13
USP38-202ENST00000510377 BSPRYQ5W0U4 402 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 PWWP2AQ96N64 755 aa15.87■□□□□ 0.13
USP38-202ENST00000510377 BAZ2AQ9UIF9 1905 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms