RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
TPM3-219ENST00000509409 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 IER5LQ5T953 404 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 PADI6Q6TGC4 694 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 FBXO18Q8NFZ0 1043 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
TPM3-219ENST00000509409 RPS6KC1Q96S38 1066 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 C2orf40Q9H1Z8 148 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
TPM3-219ENST00000509409 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
TPM3-219ENST00000509409 SORCS3Q9UPU3 1222 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 MUC6Q6W4X9 2439 aa17.03■□□□□ 0.32
TPM3-219ENST00000509409 TRIOO75962 3097 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 TECTAO75443 2155 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 INPPL1O15357 1258 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 TADA2AO75478 443 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 ADH1AP07327 375 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
TPM3-219ENST00000509409 GLUD2P49448 558 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 DSC1Q08554 894 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 MTMR3Q13615 1198 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 ELMSAN1Q6PJG2 1045 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 GPR149Q86SP6 731 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 NOSTRINQ8IVI9 506 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 UBALD2Q8IYN6 164 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 ZDHHC14Q8IZN3 488 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 ASIC4Q96FT7 647 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 PRRX2Q99811 253 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 DPP7Q9UHL4 492 aa17.02■□□□□ 0.32
TPM3-219ENST00000509409 F8W810 466 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 N4BP3O15049 544 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 TEX28O15482 410 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 ASGR2P07307 311 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 CYP11B2P19099 503 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
TPM3-219ENST00000509409 MAPK6Q16659 721 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 HAUS3Q68CZ6 603 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 CCDC149Q6ZUS6 474 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 RABGGTAQ92696 567 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 IFT74Q96LB3 600 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 FZD8Q9H461 694 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 POLD4Q9HCU8 107 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 MAN1C1Q9NR34 630 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 LRWD1Q9UFC0 647 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 USTQ9Y2C2 406 aa17.01■□□□□ 0.31
TPM3-219ENST00000509409 CCDC195A0A1B0GUA6 201 aa17■□□□□ 0.31
TPM3-219ENST00000509409 BRD1O95696 1058 aa17■□□□□ 0.31
TPM3-219ENST00000509409 GLUD1P00367 558 aa17■□□□□ 0.31
TPM3-219ENST00000509409 PRKCBP05771 671 aa17■□□□□ 0.31
TPM3-219ENST00000509409 AVPR2P30518 371 aa17■□□□□ 0.31
TPM3-219ENST00000509409 TRAPPC10P48553 1259 aa17■□□□□ 0.31
TPM3-219ENST00000509409 MRE11P49959 708 aa17■□□□□ 0.31
TPM3-219ENST00000509409 PTPN5P54829 565 aa17■□□□□ 0.31
TPM3-219ENST00000509409 DSG1Q02413 1049 aa17■□□□□ 0.31
TPM3-219ENST00000509409 GRIK3Q13003 919 aa17■□□□□ 0.31
TPM3-219ENST00000509409 FAM187BQ17R55 369 aa17■□□□□ 0.31
TPM3-219ENST00000509409 USP41Q3LFD5 358 aa17■□□□□ 0.31
TPM3-219ENST00000509409 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
TPM3-219ENST00000509409 FUT10Q6P4F1 479 aa17■□□□□ 0.31
TPM3-219ENST00000509409 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
TPM3-219ENST00000509409 PALB2Q86YC2 1186 aa17■□□□□ 0.31
TPM3-219ENST00000509409 PRSS33Q8NF86 280 aa17■□□□□ 0.31
TPM3-219ENST00000509409 FEZF2Q8TBJ5 459 aa17■□□□□ 0.31
TPM3-219ENST00000509409 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
TPM3-219ENST00000509409 RXFP1Q9HBX9 757 aa17■□□□□ 0.31
TPM3-219ENST00000509409 SNTG2Q9NY99 539 aa17■□□□□ 0.31
TPM3-219ENST00000509409 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
TPM3-219ENST00000509409 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 MUTP22033 750 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 NBR1Q14596 966 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 PPP2R5AQ15172 486 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 SPATA31D4Q6ZUB0 917 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 GLYCTKQ8IVS8 523 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
TPM3-219ENST00000509409 BSNDQ8WZ55 320 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 B3GALT6Q96L58 329 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 ADAM28Q9UKQ2 775 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 USP20Q9Y2K6 914 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 STK24Q9Y6E0 443 aa16.99■□□□□ 0.31
TPM3-219ENST00000509409 ACKR2O00590 384 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 PDGFBP01127 241 aaPredicted RBP16.98■□□□□ 0.31
TPM3-219ENST00000509409 THP07101 528 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 NAMPTP43490 491 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■□□ 15.5
TPM3-219ENST00000509409 VCPP55072 806 aaKnown RBP16.98■□□□□ 0.31
TPM3-219ENST00000509409 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
TPM3-219ENST00000509409 ECM1Q16610 540 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 C15orf39Q6ZRI6 1047 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 RAB34Q9BZG1 259 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 SMOC2Q9H3U7 446 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 PDZD7Q9H5P4 517 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms