RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 FOXF2Q12947 444 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 BEAN1Q3B7T3 259 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 GDF7Q7Z4P5 450 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 LYSMD2Q8IV50 215 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 SLC41A1Q8IVJ1 513 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 OR5M3Q8NGP4 307 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 SH3TC2Q8TF17 1288 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 SCARB1Q8WTV0 552 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 NELL1Q92832 810 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 DCLRE1CQ96SD1 692 aaKnown RBP3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 MTFR1LQ9H019 292 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 AKIP1Q9NQ31 210 aa3.34□□□□□ -1.87
DEPDC1B-204ENST00000509006 GAGE12BA1L429 117 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 GAGE12HA6NDE8 117 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 UNC119BA6NIH7 251 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZNF891A8MT65 544 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 NDUFA10O95299 355 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 CTGFP29279 349 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 BMPR1AP36894 532 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 PHC1P78364 1004 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 NFE2L2Q16236 605 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 ERCC6LQ2NKX8 1250 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 CCDC178Q5BJE1 867 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 GPR158Q5T848 1215 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 METRNLQ641Q3 311 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 DRICH1Q6PGQ1 229 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 ESPNLQ6ZVH7 1005 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 XYLT1Q86Y38 959 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 NXPE1Q8N323 547 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 CHTF18Q8WVB6 975 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 GAB3Q8WWW8 586 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 COQ10AQ96MF6 247 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 DNAJC2Q99543 621 aaKnown RBP3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 TEX101Q9BY14 249 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 EPC1Q9H2F5 836 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 ALG13Q9NP73 1137 aaKnown RBP3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 MSRAQ9UJ68 235 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZKSCAN5Q9Y2L8 839 aa3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 COL3A1P02461 1466 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1B-204ENST00000509006 PRSS38A1L453 326 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 LCHNA4D1U4 455 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ANKRD62A6NC57 917 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 DNAJC9-AS1A6NH13 148 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 MARCH11A6NNE9 402 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 RNASET2O00584 256 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 CLSTN1O94985 981 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ASMTLO95671 621 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 HKR1P10072 659 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ELLP55199 621 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 DUSP2Q05923 314 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 BMS1Q14692 1282 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 NOP9Q86U38 636 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 SYNPOQ8N3V7 929 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 C9orf106Q8NAJ2 232 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 CPEB3Q8NE35 698 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 SMG7Q92540 1137 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ADAM2Q99965 735 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 CHMP4AQ9BY43 222 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 MS4A5Q9H3V2 200 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 THG1LQ9NWX6 298 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 EVLQ9UI08 416 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 USP18Q9UMW8 372 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 TMA7Q9Y2S6 64 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 PPP2R3BQ9Y5P8 575 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 NUMBLQ9Y6R0 609 aa3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ARID4BQ4LE39 1312 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZMYM3Q14202 1370 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 CADPSQ9ULU8 1353 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 ST20-MTHFSA0A0A6YYL1 179 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 DIRC3C9JPN6 131 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 NRP2O60462 931 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 KPNA6O60684 536 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 GAS7O60861 476 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 TMEM127O75204 238 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 RBMXL2O75526 392 aaKnown RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 MATN4O95460 622 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 MANFP55145 182 aaKnown RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 RNASE9P60153 205 aaKnown RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 NHLH2Q02577 135 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 MGAT5Q09328 741 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 TP53BP2Q13625 1128 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 UBE3CQ15386 1083 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 FAM102AQ5T9C2 384 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 LRRTM3Q86VH5 581 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 PLXDC1Q8IUK5 500 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 SRRM1Q8IYB3 904 aaKnown RBP3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZNF610Q8N9Z0 462 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 SMC1BQ8NDV3 1235 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 ASB10Q8WXI3 467 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 FERMT2Q96AC1 680 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 PRDM12Q9H4Q4 367 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 IFT57Q9NWB7 429 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 PRSS50Q9UI38 385 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 TLK1Q9UKI8 766 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 CLCA2Q9UQC9 943 aa3.31□□□□□ -1.88
DEPDC1B-204ENST00000509006 PIPSLA2A3N6 862 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 PRR5-ARHGAP8B1AHC4 643 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 IGLV2-14P01704 120 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 LTA4HP09960 611 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms