RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C2CD2LO14523 706 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 N4BP3O15049 544 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 CLASP2O75122 1294 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 HIP1RO75146 1068 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 CTSAP10619 480 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 PEX3P56589 373 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 KCNC3Q14003 757 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 EEF1DP3Q658K8 133 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 COLGALT2Q8IYK4 626 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 RPS6KC1Q96S38 1066 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 TMEM175Q9BSA9 504 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 C1QTNF1Q9BXJ1 281 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 MARCH5Q9NX47 278 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 SNTG2Q9NY99 539 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 GIT1Q9Y2X7 761 aa16.34■□□□□ 0.21
UBE2D3-228ENST00000508974 TRIP11Q15643 1979 aa16.33■□□□□ 0.21
UBE2D3-228ENST00000508974 EPCAMP16422 314 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 CUL4AQ13619 759 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 FAM187BQ17R55 369 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
UBE2D3-228ENST00000508974 CARNS1A5YM72 827 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 C19orf67A6NJJ6 358 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 SFI1A8K8P3 1242 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 ACKR2O00590 384 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 WEE2P0C1S8 567 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 COL9A1P20849 921 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 DSC1Q08554 894 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 KANK3Q6NY19 840 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 SYCE2Q6PIF2 218 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 CABP7Q86V35 215 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 DAW1Q8N136 415 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 C12orf76Q8N812 135 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 CASP10Q92851 521 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 ADPGKQ9BRR6 497 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 CXCL16Q9H2A7 254 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 GDAQ9Y2T3 454 aa16.32■□□□□ 0.2
UBE2D3-228ENST00000508974 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 K7ERI5 159 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 INPPL1O15357 1258 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 NR1I2O75469 434 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 RECQL4O94761 1208 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 NPTX2P47972 431 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 EFNA5P52803 228 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 GRIN1Q05586 938 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 RARS2Q5T160 578 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 NT5DC1Q5TFE4 455 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 TMEM184AQ6ZMB5 413 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 DRC1Q96MC2 740 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 S1PR5Q9H228 398 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 MUTYHQ9UIF7 546 aa16.31■□□□□ 0.2
UBE2D3-228ENST00000508974 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 CASTOR2A6NHX0 329 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 SLC16A4O15374 487 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 SOD2P04179 222 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 URODP06132 367 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 MYBP10242 640 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 KLRC2P26717 231 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 GRIK3Q13003 919 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 MAPK7Q13164 816 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 TMEM31Q5JXX7 168 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 C1orf186Q6ZWK4 172 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 PAAF1Q9BRP4 392 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 LRFN3Q9BTN0 628 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 C11orf16Q9NQ32 467 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 MRPL17Q9NRX2 175 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-228ENST00000508974 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 PTGESO14684 152 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 DCXO43602 365 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 PLA2G4BP0C869 781 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 ALADP13716 330 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 GLUD2P49448 558 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 OSTNP61366 133 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 GIT2Q14161 759 aa16.29■□□□□ 0.2
UBE2D3-228ENST00000508974 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms