RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
PTPN20-220ENST00000508715 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
PTPN20-220ENST00000508715 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
PTPN20-220ENST00000508715 SCN1AP35498 2009 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 A0A0B4J269 797 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 H0YCG3 227 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 N4BP3O15049 544 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 B4GALT3O60512 393 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 TOM1L1O75674 476 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 DGKIO75912 1065 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
PTPN20-220ENST00000508715 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-220ENST00000508715 SCP2P22307 547 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 PRCPP42785 496 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 MCL1Q07820 350 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 STRN3Q13033 797 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-220ENST00000508715 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 FAM43BQ6ZT52 329 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-220ENST00000508715 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 NPAS4Q8IUM7 802 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 SMARCE1Q969G3 411 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 CCDC51Q96ER9 411 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 ACCSQ96QU6 501 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 MED15Q96RN5 788 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 SLC9A7Q96T83 725 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 MIOSQ9NXC5 875 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 PLXNA4Q9HCM2 1894 aa11.33□□□□□ -0.6
PTPN20-220ENST00000508715 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 BIN1O00499 593 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
PTPN20-220ENST00000508715 OFD1O75665 1012 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 AMHP03971 560 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 AKAP5P24588 427 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 TNFSF9P41273 254 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 KCNJ6P48051 423 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 WNT7BP56706 349 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 ALCAMQ13740 583 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 ZNF658Q5TYW1 1059 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-220ENST00000508715 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-220ENST00000508715 CASD1Q96PB1 797 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 CBWD1Q9BRT8 395 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 PLAGL2Q9UPG8 496 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 UBE4BO95155 1302 aa11.32□□□□□ -0.6
PTPN20-220ENST00000508715 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 PTGESO14684 152 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 INPPL1O15357 1258 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 RECQL4O94761 1208 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 SMC2O95347 1197 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 EOMESO95936 686 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 MBD3O95983 291 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 MCF2P10911 925 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 GRM5P41594 1212 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 LIG4P49917 911 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 RAB27AP51159 221 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 NAB2Q15742 525 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 ALKAL1Q6UXT8 129 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 GUF1Q8N442 669 aaKnown RBP11.31□□□□□ -0.6
PTPN20-220ENST00000508715 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 BICD1Q96G01 975 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 PCDHB7Q9Y5E2 793 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
PTPN20-220ENST00000508715 PRRC2BQ5JSZ5 2229 aaKnown RBP11.3□□□□□ -0.6
PTPN20-220ENST00000508715 CLIC2O15247 247 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 CLDN3O15551 220 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 ADRB2P07550 413 aa11.3□□□□□ -0.6
PTPN20-220ENST00000508715 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms