RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 CTSAP10619 480 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 SFPQP23246 707 aaKnown RBP eCLIP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 PSMA5P28066 241 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 ALDH7A1P49419 539 aaKnown RBP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 PSMC5P62195 406 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 NONOQ15233 471 aaKnown RBP eCLIP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 PTPN14Q15678 1187 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 LETM2Q2VYF4 491 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 CATSPER4Q7RTX7 472 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 ZNF410Q86VK4 478 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 TMEM105Q8N8V8 129 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 TMEM143Q96AN5 459 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 ZNF274Q96GC6 653 aaPredicted RBP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 TMEM169Q96HH4 297 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 PHF20Q9BVI0 1012 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 MRPL9Q9BYD2 267 aaKnown RBP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 DHX33Q9H6R0 707 aaKnown RBP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 CYP26B1Q9NR63 512 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 AGPAT5Q9NUQ2 364 aa10.08□□□□□ -0.8
RPS3A-206ENST00000507485 DDX25Q9UHL0 483 aaKnown RBP10.08□□□□□ -0.8
RPS3A-206ENST00000507485 H0Y858 1186 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 H3BM21 787 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 LILRB3O75022 631 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 CTDNEP1O95476 244 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 ITIH3Q06033 890 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 SCRN1Q12765 414 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 TPRNQ4KMQ1 711 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 KIAA1841Q6NSI8 718 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 TMC5Q6UXY8 1006 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 TAS1R1Q7RTX1 841 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 PRPF31Q8WWY3 499 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 KLHL5Q96PQ7 755 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 XPNPEP1Q9NQW7 623 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 RGL1Q9NZL6 768 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 LIMD1Q9UGP4 676 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 SORCS3Q9UPU3 1222 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 PCDHB2Q9Y5E7 798 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 COL4A3BPQ9Y5P4 624 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 ZFHX2Q9C0A1 2572 aaPredicted RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 SIAH2O43255 324 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 EFEMP2O95967 443 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 CNPP09543 421 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 MTHFRP42898 656 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 QARSP47897 775 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 DNM2P50570 870 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 POLGP54098 1239 aaPredicted RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 CES5AQ6NT32 575 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 GLB1LQ6UWU2 654 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 ZBTB33Q86T24 672 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 NECTIN4Q96NY8 510 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
RPS3A-206ENST00000507485 MIOSQ9NXC5 875 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
RPS3A-206ENST00000507485 NRP1O14786 923 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 REC8O95072 547 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 POMCP01189 267 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 SRGAP2CP0DJJ0 459 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 MYBP10242 640 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 RAB27AP51159 221 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 CLCN4P51793 760 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 RNASELQ05823 741 aaKnown RBP10.06□□□□□ -0.8
RPS3A-206ENST00000507485 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
RPS3A-206ENST00000507485 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 ZDHHC14Q8IZN3 488 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 TNFRSF25Q93038 417 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 DYDC2Q96IM9 177 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 CEP170P1Q96L14 293 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 LXNQ9BS40 222 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 TM6SF1Q9BZW5 370 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 INO80BQ9C086 356 aaPredicted RBP10.06□□□□□ -0.8
RPS3A-206ENST00000507485 RSAD1Q9HA92 442 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 DZANK1Q9NVP4 752 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 NR2E1Q9Y466 385 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 HES2Q9Y543 173 aa10.06□□□□□ -0.8
RPS3A-206ENST00000507485 A0A087WWV3 80 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 CPLX1O14810 134 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 TSPAN1O60635 241 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 LARGE1O95461 756 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 P4HBP07237 508 aaKnown RBP10.05□□□□□ -0.8
RPS3A-206ENST00000507485 FDPSP14324 419 aaKnown RBP10.05□□□□□ -0.8
RPS3A-206ENST00000507485 NPR3P17342 541 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 CDC42EP1Q00587 391 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 NR5A1Q13285 461 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 EMC2Q15006 297 aa10.05□□□□□ -0.8
RPS3A-206ENST00000507485 EPHA7Q15375 998 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms