RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ACKR2O00590 384 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 GLUD2P49448 558 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 PTPN21Q16825 1174 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 TMEM132AQ24JP5 1023 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 KRT79Q5XKE5 535 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 POTEGQ6S5H5 508 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 C15orf39Q6ZRI6 1047 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 SUGP1Q8IWZ8 645 aaKnown RBP15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 UBALD2Q8IYN6 164 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 HDAC7Q8WUI4 952 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 FBXL18Q96ME1 805 aa15.94■□□□□ 0.14
HMGCS1-203ENST00000507004 TMEM221A6NGB7 291 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 M0R296 226 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 LILRB3O75022 631 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 NPTXRO95502 500 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 SCNN1GP51170 649 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 DCAF4L1Q3SXM0 396 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 MAEAQ7L5Y9 396 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 RNF168Q8IYW5 571 aaPredicted RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 ZDHHC14Q8IZN3 488 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 IGSF22Q8N9C0 903 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 TDRD5Q8NAT2 981 aaKnown RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 CMASQ8NFW8 434 aaPredicted RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 ACSF2Q96CM8 615 aaPredicted RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 TIPINQ9BVW5 301 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 APOL6Q9BWW8 343 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 C17orf75Q9HAS0 396 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 RXFP1Q9HBX9 757 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 GPRC5CQ9NQ84 441 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 PARP2Q9UGN5 583 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 DNM3Q9UQ16 869 aa15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 PRG3Q9Y2Y8 225 aaPredicted RBP15.93■□□□□ 0.14
HMGCS1-203ENST00000507004 B4GALT5O43286 388 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 PRKCBP05771 671 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 CNPP09543 421 aaKnown RBP15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 EPCAMP16422 314 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 CLCN4P51793 760 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 AFF1P51825 1210 aaKnown RBP15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 DSG1Q02413 1049 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 ELAVL2Q12926 359 aaKnown RBP15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 PTGDRQ13258 359 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 TUSC3Q13454 348 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 USP41Q3LFD5 358 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 RARS2Q5T160 578 aaKnown RBP15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 PDXDC1Q6P996 788 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 DTHD1Q6ZMT9 781 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 HFE2Q6ZVN8 426 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 GPR149Q86SP6 731 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 C4orf32Q8N8J7 132 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 SNX29Q8TEQ0 813 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 AUTS2Q8WXX7 1259 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 PBXIP1Q96AQ6 731 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 APOL5Q9BWW9 433 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 VN1R3Q9BXE9 311 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 BHMT2Q9H2M3 363 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 POMKQ9H5K3 350 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 MARCH5Q9NX47 278 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 SORCS3Q9UPU3 1222 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 HES2Q9Y543 173 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 TECTAO75443 2155 aa15.92■□□□□ 0.14
HMGCS1-203ENST00000507004 B4GALT3O60512 393 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 EFEMP2O95967 443 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 GLUD1P00367 558 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 NUBP1P53384 320 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 MTMR3Q13615 1198 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 KIAA0319Q5VV43 1072 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 FUT10Q6P4F1 479 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 CCDC149Q6ZUS6 474 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 OTOP3Q7RTS5 596 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 STAMQ92783 540 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 DRC1Q96MC2 740 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 ZFP42Q96MM3 310 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 IRF2BPLQ9H1B7 796 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 PLEKHA4Q9H4M7 779 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 FNIP2Q9P278 1114 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 ADAM28Q9UKQ2 775 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 KIAA1024Q9UPX6 916 aa15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGCS1-203ENST00000507004 TDRD15B5MCY1 1934 aaKnown RBP15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 SLC26A4O43511 780 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 TADA2AO75478 443 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 SSBP05455 408 aaKnown RBP eCLIP15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 THP07101 528 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 AKAP5P24588 427 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 FBXL6Q8N531 539 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 GSTCDQ8NEC7 633 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 CCDC113Q9H0I3 377 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 PDZD7Q9H5P4 517 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms