RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 CCDC197Q8NCU1 140 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
PHF3-208ENST00000506783 ISCUQ9H1K1 167 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 KIF9Q9HAQ2 790 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 PIH1D1Q9NWS0 290 aaKnown RBP10.28□□□□□ -0.76
PHF3-208ENST00000506783 ODF2LQ9ULJ1 636 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 COL14A1Q05707 1796 aaKnown RBP10.28□□□□□ -0.76
PHF3-208ENST00000506783 LRRD1A4D1F6 860 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 A8MUI8 341 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 HMGB1P1B2RPK0 211 aaPredicted RBP10.28□□□□□ -0.76
PHF3-208ENST00000506783 EYA4O95677 639 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 WEE2P0C1S8 567 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 BRAFP15056 766 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 AARSP49588 968 aaKnown RBP eCLIP10.28□□□□□ -0.764e-6■■■■□ 24
PHF3-208ENST00000506783 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 XXYLT1Q8NBI6 393 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 KLHL29Q96CT2 875 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 ZHX2Q9Y6X8 837 aa10.28□□□□□ -0.76
PHF3-208ENST00000506783 GRIN2DO15399 1336 aa10.27□□□□□ -0.76
PHF3-208ENST00000506783 SGK1O00141 431 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 KITP10721 976 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 SCP2P22307 547 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 RRM1P23921 792 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 GPC5P78333 572 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 CYP4A22Q5TCH4 519 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 FRMD5Q7Z6J6 570 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 ERP44Q9BS26 406 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 ANAPC5Q9UJX4 755 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 DNM1LO00429 736 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 ECEL1O95672 775 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 NSFP46459 744 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 DNAJC3Q13217 504 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 SAYSD1Q9NPB0 183 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 ABCF3Q9NUQ8 709 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 NKIRAS1Q9NYS0 192 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 G3BP2Q9UN86 482 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 PHRF1Q9P1Y6 1649 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 NEBLO76041 1014 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 PDHA1P08559 390 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 YWHABP31946 246 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 PIK3CAP42336 1068 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 SGSM1Q2NKQ1 1148 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 FAXCQ5TGI0 409 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 TMC3Q7Z5M5 1100 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 NOP9Q86U38 636 aaKnown RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 HOOK3Q86VS8 718 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 HIPK4Q8NE63 616 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 NT5C1BQ96P26 610 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 CALN1Q9BXU9 219 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
PHF3-208ENST00000506783 TMBIM4Q9HC24 238 aa10.27□□□□□ -0.77
PHF3-208ENST00000506783 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 TMEM120BA0PK00 339 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CCDC78A2IDD5 438 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CHKAP35790 457 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 DMP1Q13316 513 aaPredicted RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 MTMR2Q13614 643 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 SNRNP35Q16560 246 aaKnown RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 UGCGQ16739 394 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 FIGNQ5HY92 759 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 MCTP2Q6DN12 878 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 NLGN2Q8NFZ4 835 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CHURC1Q8WUH1 139 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 PIK3R5Q8WYR1 880 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CNOT7Q9UIV1 285 aaKnown RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 PNMA3Q9UL41 463 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 SUGT1Q9Y2Z0 365 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 BZW2Q9Y6E2 419 aaKnown RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 RASA4BC9J798 803 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 RASA4O43374 803 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CFHP08603 1231 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 RARAP10276 462 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 RALAP11233 206 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ATF2P15336 505 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ITGB5P18084 799 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 CPA2P48052 419 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ITGB3BPQ13352 177 aaPredicted RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 CCDC6Q16204 474 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 BBS9Q3SYG4 887 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ZCWPW2Q504Y3 356 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 IL31Q6EBC2 164 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 TMEM237Q96Q45 408 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 PCDHB18PQ96TA0 734 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 STK33Q9BYT3 514 aa10.26□□□□□ -0.77
PHF3-208ENST00000506783 MARCOQ9UEW3 520 aaPredicted RBP10.26□□□□□ -0.77
PHF3-208ENST00000506783 IL1R1P14778 569 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms