RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 PCDHB2Q9Y5E7 798 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 PCDHGC5Q9Y5F6 944 aa14.45□□□□□ -0.1
TCOF1-209ENST00000506630 PHLPP2Q6ZVD8 1323 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 CNTNAP2Q9UHC6 1331 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 PDCD11Q14690 1871 aaKnown RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 MEIS3P2A8K0S8 358 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 SFI1A8K8P3 1242 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 CUTAO60888 179 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 NPTXRO95502 500 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 STAT6P42226 847 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 NPTX2P47972 431 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 PRPF4BQ13523 1007 aaKnown RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 CBX2Q14781 532 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 FAM187BQ17R55 369 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 ARSHQ5FYA8 562 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 RRAGBQ5VZM2 374 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 ADGRD2Q7Z7M1 963 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 KLHL23Q8NBE8 558 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 KCNG4Q8TDN1 519 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 MICAL1Q8TDZ2 1067 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 RPGRIP1Q96KN7 1286 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 CASD1Q96PB1 797 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 APOL6Q9BWW8 343 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 PHF7Q9BWX1 381 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 CCDC113Q9H0I3 377 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 FZD8Q9H461 694 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 TLE6Q9H808 572 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 C17orf75Q9HAS0 396 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 TYW1Q9NV66 732 aaKnown RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 STK17AQ9UEE5 414 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 INPP5FQ9Y2H2 1132 aa14.44□□□□□ -0.1
TCOF1-209ENST00000506630 USP15Q9Y4E8 981 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-209ENST00000506630 TECTAO75443 2155 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 FSD2A1L4K1 749 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 ZNF623O75123 536 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 FAM13AO94988 1023 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 PLS3P13797 630 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 ME1P48163 572 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 EFNA5P52803 228 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 TCF15Q12870 199 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 SLC27A1Q6PCB7 646 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 GLB1LQ6UWU2 654 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 CCDC73Q6ZRK6 1079 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 PDILTQ8N807 584 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 SMG8Q8ND04 991 aaKnown RBP14.43□□□□□ -0.1
TCOF1-209ENST00000506630 CNNM3Q8NE01 707 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 REEP2Q9BRK0 252 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 MRPL9Q9BYD2 267 aaKnown RBP14.43□□□□□ -0.1
TCOF1-209ENST00000506630 PANK2Q9BZ23 570 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 RSAD1Q9HA92 442 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 AAASQ9NRG9 546 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 ODF2LQ9ULJ1 636 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 BARX2Q9UMQ3 279 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-209ENST00000506630 USP20Q9Y2K6 914 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 IPPQ9Y573 584 aa14.43□□□□□ -0.1
TCOF1-209ENST00000506630 A0A1B0GUA9 196 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 K7ERI5 159 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ACKR2O00590 384 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 N4BP3O15049 544 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 SLC16A4O15374 487 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 GFRA3O60609 400 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 TBCAO75347 108 aaKnown RBP14.42□□□□□ -0.1
TCOF1-209ENST00000506630 EDN1P05305 212 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ITGA4P13612 1032 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 LAG3P18627 525 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 DDIT3P35638 169 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 SMTNP53814 917 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 KRT85P78386 507 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 LRRC55Q6ZSA7 311 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 MRPL10Q7Z7H8 261 aaKnown RBP14.42□□□□□ -0.1
TCOF1-209ENST00000506630 HACE1Q8IYU2 909 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 COLGALT1Q8NBJ5 622 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 URGCPQ8TCY9 931 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ADPGKQ9BRR6 497 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 NXF3Q9H4D5 531 aaKnown RBP14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 PDZD7Q9H5P4 517 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 CWH43Q9H720 699 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 LARSQ9P2J5 1176 aaKnown RBP14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ARHGAP28Q9P2N2 729 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 HES2Q9Y543 173 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 PCDHB12Q9Y5F1 795 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 ATP6V1DQ9Y5K8 247 aa14.42□□□□□ -0.1
TCOF1-209ENST00000506630 A0A087X0B3 334 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 OFD1O75665 1012 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 GLP2RO95838 553 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 UBE3AQ05086 875 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 RNASELQ05823 741 aaKnown RBP14.41□□□□□ -0.1
TCOF1-209ENST00000506630 GIT2Q14161 759 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 NOMO2Q5JPE7 1267 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 SV2BQ7L1I2 683 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 DYMQ7RTS9 669 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 THNSL1Q8IYQ7 743 aa14.41□□□□□ -0.1
TCOF1-209ENST00000506630 MYCT1Q8N699 235 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms