RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 LIG1P18858 919 aa8□□□□□ -1.13
GYPB-206ENST00000506516 ABCD1P33897 745 aa8□□□□□ -1.13
GYPB-206ENST00000506516 STRN3Q13033 797 aa8□□□□□ -1.13
GYPB-206ENST00000506516 PRPF4BQ13523 1007 aaKnown RBP8□□□□□ -1.13
GYPB-206ENST00000506516 PAN2Q504Q3 1202 aaKnown RBP8□□□□□ -1.13
GYPB-206ENST00000506516 ARSHQ5FYA8 562 aa8□□□□□ -1.13
GYPB-206ENST00000506516 SPOUT1Q5T280 376 aaKnown RBP8□□□□□ -1.13
GYPB-206ENST00000506516 SLC27A1Q6PCB7 646 aa8□□□□□ -1.13
GYPB-206ENST00000506516 BLOC1S3Q6QNY0 202 aa8□□□□□ -1.13
GYPB-206ENST00000506516 APBB1IPQ7Z5R6 666 aaPredicted RBP8□□□□□ -1.13
GYPB-206ENST00000506516 RETREG3Q86VR2 466 aa8□□□□□ -1.13
GYPB-206ENST00000506516 SCUBE3Q8IX30 993 aa8□□□□□ -1.13
GYPB-206ENST00000506516 TMEM192Q8IY95 271 aa8□□□□□ -1.13
GYPB-206ENST00000506516 MYCT1Q8N699 235 aa8□□□□□ -1.13
GYPB-206ENST00000506516 PDILTQ8N807 584 aa8□□□□□ -1.13
GYPB-206ENST00000506516 SLC17A8Q8NDX2 589 aa8□□□□□ -1.13
GYPB-206ENST00000506516 BSNDQ8WZ55 320 aa8□□□□□ -1.13
GYPB-206ENST00000506516 ADPGKQ9BRR6 497 aa8□□□□□ -1.13
GYPB-206ENST00000506516 TMEM117Q9H0C3 514 aa8□□□□□ -1.13
GYPB-206ENST00000506516 CUEDC2Q9H467 287 aa8□□□□□ -1.13
GYPB-206ENST00000506516 ZHX3Q9H4I2 956 aa8□□□□□ -1.13
GYPB-206ENST00000506516 PRDM12Q9H4Q4 367 aa8□□□□□ -1.13
GYPB-206ENST00000506516 PARVGQ9HBI0 331 aa8□□□□□ -1.13
GYPB-206ENST00000506516 PCDHB2Q9Y5E7 798 aa8□□□□□ -1.13
GYPB-206ENST00000506516 ADGRA3Q8IWK6 1321 aa8□□□□□ -1.13
GYPB-206ENST00000506516 NPHP3-ACAD11A0A0J9YXS1 232 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 N4BP3O15049 544 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 POLR2DO15514 142 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 TRAK2O60296 914 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 FGFR1P11362 822 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 ITGA4P13612 1032 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 FOSL2P15408 326 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 ARF4P18085 180 aaPredicted RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 IGFBP4P22692 258 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 CMA1P23946 247 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 BMPR1AP36894 532 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 GIT2Q14161 759 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 PTPROQ16827 1216 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 EPC2Q52LR7 807 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 ADALQ6DHV7 355 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 SHC4Q6S5L8 630 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 GLB1LQ6UWU2 654 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 RNF19BQ6ZMZ0 732 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 DYMQ7RTS9 669 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 MRPL10Q7Z7H8 261 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 ZNF598Q86UK7 904 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 CEP57L1Q8IYX8 460 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 DAW1Q8N136 415 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 URGCPQ8TCY9 931 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 LEO1Q8WVC0 666 aaPredicted RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 MYLIPQ8WY64 445 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 EVPLQ92817 2033 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 CLP1Q92989 425 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 CPB2Q96IY4 423 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 GUCD1Q96NT3 240 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 CASD1Q96PB1 797 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 REEP2Q9BRK0 252 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 C17orf80Q9BSJ5 609 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 PLVAPQ9BX97 442 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 MRPL9Q9BYD2 267 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 RC3H2Q9HBD1 1191 aaKnown RBP7.99□□□□□ -1.13
GYPB-206ENST00000506516 LMCD1Q9NZU5 365 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 KANSL3Q9P2N6 904 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 MTUS1Q9ULD2 1270 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 GIT1Q9Y2X7 761 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 PCDHB12Q9Y5F1 795 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 CNTNAP2Q9UHC6 1331 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 TET1Q8NFU7 2136 aa7.99□□□□□ -1.13
GYPB-206ENST00000506516 WDR81Q562E7 1941 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 CARNS1A5YM72 827 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 H3BNC9 293 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 RFXAPO00287 272 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 SLC16A4O15374 487 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 B4GALT5O43286 388 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 OFD1O75665 1012 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 ARHGEF15O94989 841 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 CTNNB1P35222 781 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 ZNF131P52739 623 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 COPS2P61201 443 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 RNASELQ05823 741 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 MAPK7Q13164 816 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 GPM6BQ13491 265 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 LONRF3Q496Y0 759 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 UBXN11Q5T124 520 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 ATF7IP2Q5U623 682 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 RESP18Q5W5W9 173 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 FAM178BQ8IXR5 827 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 LRRC43Q8N309 656 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 HELQQ8TDG4 1101 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 LRRC15Q8TF66 581 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 LPPQ93052 612 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 DHX58Q96C10 678 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 FAM193BQ96PV7 902 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms