RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	LOC730098	B7Z3J9	87 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	NRP1	O14786	923 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	INPPL1	O15357	1258 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	DDHD2	O94830	711 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	NPTXR	O95502	500 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	PRPH	P41219	470 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	MTHFR	P42898	656 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	EFNA5	P52803	228 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	RBM10	P98175	930 aa	Known RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	GRIK3	Q13003	919 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	PRPF4B	Q13523	1007 aa	Known RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	AMHR2	Q16671	573 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	KIAA1841	Q6NSI8	718 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	TMEM173	Q86WV6	379 aa	Predicted RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	SUSD6	Q92537	303 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	KIF12	Q96FN5	646 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	TMX3	Q96JJ7	454 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	BHMT2	Q9H2M3	363 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	ADAM7	Q9H2U9	754 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	GPRC5C	Q9NQ84	441 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	DDX19A	Q9NUU7	478 aa	Known RBP	11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	MUTYH	Q9UIF7	546 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	KCNG1	Q9UIX4	513 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	KIAA1024	Q9UPX6	916 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	DNM3	Q9UQ16	869 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	SMC3	Q9UQE7	1217 aa		11.51	□□□□□ -0.57
NR1I3-222	ENST00000506018	B4GALT5	O43286	388 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	SOD2	P04179	222 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	PRKCB	P05771	671 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	KLRC2	P26717	231 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	GJB2	P29033	226 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	SCNN1G	P51170	649 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	CLCN6	P51797	869 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	NBR1	Q14596	966 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	PTPN14	Q15678	1187 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	DCAF4L1	Q3SXM0	396 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	ATAT1	Q5SQI0	421 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	SYCE2	Q6PIF2	218 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	ZBTB33	Q86T24	672 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	CABP7	Q86V35	215 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	COLGALT2	Q8IYK4	626 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	KCTD17	Q8N5Z5	321 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	IGSF22	Q8N9C0	903 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	PHF12	Q96QT6	1004 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	APOL5	Q9BWW9	433 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	S1PR5	Q9H228	398 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	FZD8	Q9H461	694 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	NXF3	Q9H4D5	531 aa	Known RBP	11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	HES2	Q9Y543	173 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	PCDHB6	Q9Y5E3	794 aa		11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.5	□□□□□ -0.57
NR1I3-222	ENST00000506018	ACKR2	O00590	384 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	SSB	P05455	408 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	ADH1A	P07327	375 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	HSP90AA1	P07900	732 aa	Known RBP	11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	LIG1	P18858	919 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	AKAP5	P24588	427 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	GLUD2	P49448	558 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	CREM	Q03060	361 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	DMP1	Q13316	513 aa	Predicted RBP	11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	C4orf32	Q8N8J7	132 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	AUTS2	Q8WXX7	1259 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	EDA	Q92838	391 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	FAM122A	Q96E09	287 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	CDK5RAP3	Q96JB5	506 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	DRC1	Q96MC2	740 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	MFSD14A	Q96MC6	490 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	ZFP42	Q96MM3	310 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	HERC2P3	Q9BVR0	1158 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	NT5C3A	Q9H0P0	336 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	SFXN1	Q9H9B4	322 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	C11orf16	Q9NQ32	467 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	TRIP11	Q15643	1979 aa		11.49	□□□□□ -0.57
NR1I3-222	ENST00000506018	CIT	O14578	2027 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	MYO10	Q9HD67	2058 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018		K7ELQ4	463 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018		K7ERI5	159 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	TOB1	P50616	345 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	AFF1	P51825	1210 aa	Known RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	DSC1	Q08554	894 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	RARS2	Q5T160	578 aa	Known RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	CDR2L	Q86X02	465 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	KLHL5	Q96PQ7	755 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	TIPIN	Q9BVW5	301 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	C17orf75	Q9HAS0	396 aa		11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
NR1I3-222	ENST00000506018	CCDC169	A6NNP5	214 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	C2CD2L	O14523	706 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	MAP3K13	O43283	966 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	B4GALT3	O60512	393 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	TADA2A	O75478	443 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	BMP15	O95972	392 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	TH	P07101	528 aa		11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	CNP	P09543	421 aa	Known RBP	11.47	□□□□□ -0.57
NR1I3-222	ENST00000506018	EPCAM	P16422	314 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms