RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 PBX3P40426 434 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 STAT6P42226 847 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 CLCN5P51795 746 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 GIT2Q14161 759 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 TMEM119Q4V9L6 283 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 CLLU1OSQ5K130 101 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 CNNM4Q6P4Q7 775 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ASCL5Q7RTU5 278 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ZNF598Q86UK7 904 aaKnown RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 LENG9Q96B70 501 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 ZNF577Q9BSK1 485 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 MMTAG2Q9BU76 263 aaKnown RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 MRPL9Q9BYD2 267 aaKnown RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 IRAK3Q9Y616 596 aa11.86□□□□□ -0.51
CPNE4-206ENST00000505957 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
CPNE4-206ENST00000505957 BECN2A8MW95 431 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-206ENST00000505957 CDC25BP30305 580 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 CLCN3P51790 818 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 KCNB1Q14721 858 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 KARSQ15046 597 aaKnown RBP11.85□□□□□ -0.51
CPNE4-206ENST00000505957 ATAT1Q5SQI0 421 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 TDRD5Q8NAT2 981 aaKnown RBP11.85□□□□□ -0.51
CPNE4-206ENST00000505957 ERCC4Q92889 916 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-206ENST00000505957 CALML4Q96GE6 196 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 MTRQ99707 1265 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-206ENST00000505957 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 LRWD1Q9UFC0 647 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 CDH22Q9UJ99 828 aa11.85□□□□□ -0.51
CPNE4-206ENST00000505957 PP2D1A8MPX8 630 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 CXCL14O95715 111 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
CPNE4-206ENST00000505957 PLCG1P19174 1290 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 BMP6P22004 513 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 TXKP42681 527 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 GPC3P51654 580 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-206ENST00000505957 BCAR1P56945 870 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 TPM4P67936 248 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 CDC42EP1Q00587 391 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 AMPD3Q01432 767 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 MYL5Q02045 173 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 NCAPHQ15003 741 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 ENOX1Q8TC92 643 aaKnown RBP11.84□□□□□ -0.51
CPNE4-206ENST00000505957 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 TMEM169Q96HH4 297 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 C7orf25Q9BPX7 421 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 PLXNA3P51805 1871 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 FAM186AA6NE01 2351 aa11.84□□□□□ -0.51
CPNE4-206ENST00000505957 CFAP54Q96N23 3096 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 WDR64B1ANS9 1081 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 BIN1O00499 593 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 ADCY5O95622 1261 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 OATP04181 439 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 ASGR2P07307 311 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 CTSAP10619 480 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 MUTP22033 750 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 RARS2Q5T160 578 aaKnown RBP11.83□□□□□ -0.52
CPNE4-206ENST00000505957 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 ERMP1Q7Z2K6 904 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 DDX53Q86TM3 631 aaKnown RBP11.83□□□□□ -0.52
CPNE4-206ENST00000505957 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 LRRC71Q8N4P6 559 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 AOPEPQ8N6M6 819 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 RNF169Q8NCN4 708 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
CPNE4-206ENST00000505957 MRFAP1L1Q96HT8 127 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 MFSD1Q9H3U5 465 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
CPNE4-206ENST00000505957 DBR1Q9UK59 544 aaKnown RBP11.83□□□□□ -0.52
CPNE4-206ENST00000505957 EVPLQ92817 2033 aa11.82□□□□□ -0.52
CPNE4-206ENST00000505957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
CPNE4-206ENST00000505957 POTEMA6NI47 508 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms