RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 AGPAT1Q99943 283 aa18.27■□□□□ 0.51
LIN54-204ENST00000505397 TRIM51Q9BSJ1 452 aa18.27■□□□□ 0.51
LIN54-204ENST00000505397 TRAPPC3O43617 180 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 PPP2R2AP63151 447 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 ZC3H15Q8WU90 426 aaKnown RBP18.26■□□□□ 0.51
LIN54-204ENST00000505397 ERP44Q9BS26 406 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 DPH5Q9H2P9 285 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 ERVK-5Q9HDB9 667 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 CNOT8Q9UFF9 292 aaKnown RBP18.26■□□□□ 0.51
LIN54-204ENST00000505397 SRCAPQ6ZRS2 3230 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 DRG2P55039 364 aaKnown RBP18.26■□□□□ 0.51
LIN54-204ENST00000505397 KCTD19Q17RG1 926 aaPredicted RBP18.26■□□□□ 0.51
LIN54-204ENST00000505397 ICE2Q659A1 982 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 MMS22LQ6ZRQ5 1243 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 ANKRD13AQ8IZ07 590 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 ALG3Q92685 438 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 CDCA5Q96FF9 252 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 CENPHQ9H3R5 247 aa18.26■□□□□ 0.51
LIN54-204ENST00000505397 MYH11P35749 1972 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 FAM187AA6NFU0 413 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 E7EVH7 732 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 EXOC3O60645 756 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 HIP1RO75146 1068 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 KIAA0754O94854 1291 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 DR1Q01658 176 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 DHX34Q14147 1143 aaKnown RBP18.25■□□□□ 0.51
LIN54-204ENST00000505397 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 OTUD6BQ8N6M0 293 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 NSUN6Q8TEA1 469 aaKnown RBP18.25■□□□□ 0.51
LIN54-204ENST00000505397 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 VTI1AQ96AJ9 217 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 FMO2Q99518 471 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.25■□□□□ 0.51
LIN54-204ENST00000505397 GMNCA6NCL1 334 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 P4HA2O15460 535 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
LIN54-204ENST00000505397 EIF3BP55884 814 aaKnown RBP18.25■□□□□ 0.51
LIN54-204ENST00000505397 ARHGAP44Q17R89 818 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 TLCD1Q96CP7 247 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 EPB41L4BQ9H329 900 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
LIN54-204ENST00000505397 KIAA1217Q5T5P2 1943 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 ARHGEF35A5YM69 484 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 NR3C2P08235 984 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 GPR162Q16538 588 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 NLRX1Q86UT6 975 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 C12orf56Q8IXR9 622 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 CYFIP2Q96F07 1278 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 LRRC4CQ9HCJ2 640 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 NOVA2Q9UNW9 492 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 PFASO15067 1338 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 GOLGA6L10A0A0M3HER8 536 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 MCCD1P59942 119 aaPredicted RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 DLG4P78352 724 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 INTS8Q75QN2 995 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 ERO1BQ86YB8 467 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 SLC20A1Q8WUM9 679 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 PPANQ9NQ55 473 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 A1CFQ9NQ94 594 aaKnown RBP18.24■□□□□ 0.51
LIN54-204ENST00000505397 CYP39A1Q9NYL5 469 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 USP20Q9Y2K6 914 aa18.24■□□□□ 0.51
LIN54-204ENST00000505397 C5orf60A6NFR6 353 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 DCDC2CA8MYV0 355 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 MIF4GDA9UHW6 222 aaKnown RBP18.23■□□□□ 0.51
LIN54-204ENST00000505397 NUDT17P0C025 328 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 EPC2Q52LR7 807 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 EAPPQ56P03 285 aaPredicted RBP18.23■□□□□ 0.51
LIN54-204ENST00000505397 MAF1Q9H063 256 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 PTGIRP43119 386 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
LIN54-204ENST00000505397 C1orf220Q5T0J3 134 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 SCN4AP35499 1836 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 EMSYQ7Z589 1322 aa18.23■□□□□ 0.51
LIN54-204ENST00000505397 IRF6O14896 467 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 KIAA0391O15091 583 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 LRRN2O75325 713 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 TMOD1P28289 359 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 JAK3P52333 1124 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 MAGOHP61326 146 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 KRT76Q01546 638 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 PPP3CAQ08209 521 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 ZNF211Q13398 564 aaPredicted RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 PRPF4BQ13523 1007 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 ALCAMQ13740 583 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 ZDHHC24Q6UX98 284 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 ARHGEF19Q8IW93 802 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 RDH13Q8NBN7 331 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms