RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 SMG7Q92540 1137 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 CPB2Q96IY4 423 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 APOL6Q9BWW8 343 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 DUSP12Q9UNI6 340 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 ZFHX2Q9C0A1 2572 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 PTPRZ1P23471 2315 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 ZBTB39O15060 712 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 NEFLP07196 543 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 NBL1P41271 181 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 TXKP42681 527 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 RARRES1P49788 294 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 GRIK3Q13003 919 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 NR5A1Q13285 461 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 CAPSQ13938 189 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 TAS1R1Q7RTX1 841 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 C2orf40Q9H1Z8 148 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 GJB4Q9NTQ9 266 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 MARCH5Q9NX47 278 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 ZDHHC7Q9NXF8 308 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 WNT16Q9UBV4 365 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 HES2Q9Y543 173 aa12.32□□□□□ -0.44
UBE2D3-219ENST00000505207 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 LRRIQ4A6NIV6 560 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 CTDNEP1O95476 244 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 NPTXRO95502 500 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 AOC1P19801 751 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 GLRA2P23416 452 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 FUT10Q6P4F1 479 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 PDXDC1Q6P996 788 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 DIS3L2Q8IYB7 885 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 RNF168Q8IYW5 571 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 ASAP3Q8TDY4 903 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 NACC1Q96RE7 527 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 TUFT1Q9NNX1 390 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 CLUHO75153 1309 aa12.31□□□□□ -0.44
UBE2D3-219ENST00000505207 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■■■ 59.2
UBE2D3-219ENST00000505207 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 N4BP3O15049 544 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 EFEMP2O95967 443 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 FDPSP14324 419 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 AKAP5P24588 427 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 AMHR2Q16671 573 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 SIX5Q8N196 739 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 NXF3Q9H4D5 531 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
UBE2D3-219ENST00000505207 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 TGM5O43548 720 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 PAPLNO95428 1278 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 THP07101 528 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 SRFP11831 508 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 FOXK2Q01167 660 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 TUSC3Q13454 348 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 HSP90AA2PQ14568 343 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 PPP2R5AQ15172 486 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 MAPK6Q16659 721 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 LIN9Q5TKA1 542 aa12.29□□□□□ -0.44
UBE2D3-219ENST00000505207 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms