RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 ACAP3Q96P50 834 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 PLIN2Q99541 437 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 ACO2Q99798 780 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 REEP2Q9BRK0 252 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 MRPL44Q9H9J2 332 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 TYW1Q9NV66 732 aaKnown RBP10.8□□□□□ -0.68
NR1I3-220ENST00000505005 CHMP5Q9NZZ3 219 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
NR1I3-220ENST00000505005 FNDC1Q4ZHG4 1894 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 A0A087WWV3 80 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 K7ENM7 598 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 HNRNPDLO14979 420 aaKnown RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 SLC16A4O15374 487 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 POLR2DO15514 142 aaKnown RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 TRAPPC3O43617 180 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 PIGRP01833 764 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 IDEP14735 1019 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 FGFR4P22455 802 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 GRM5P41594 1212 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 SYKP43405 635 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 MAPK7Q13164 816 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 AXDND1Q5T1B0 1012 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 Q7L0L9 218 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 ZNF720Q7Z2F6 126 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 KCNK18Q7Z418 384 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 NT5DC4Q86YG4 428 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 DAW1Q8N136 415 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 PDILTQ8N807 584 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 MAFAQ8NHW3 353 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 GOLGA5Q8TBA6 731 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 ACCSQ96QU6 501 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 OSBPL7Q9BZF2 842 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 NSUN3Q9H649 340 aaKnown RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 KIAA1586Q9HCI6 787 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 PANK4Q9NVE7 773 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 TBX20Q9UMR3 447 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 PLAGL2Q9UPG8 496 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 FAN1Q9Y2M0 1017 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
NR1I3-220ENST00000505005 UBE4BO95155 1302 aa10.79□□□□□ -0.68
NR1I3-220ENST00000505005 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 LCHNA4D1U4 455 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 EIF3DO15371 548 aaKnown RBP eCLIP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 FGF18O76093 207 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 NPTXRO95502 500 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 CLTAP09496 248 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 FGFR1P11362 822 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 LIG1P18858 919 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 GRIN1Q05586 938 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 MCL1Q07820 350 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 SURF1Q15526 300 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 PAN2Q504Q3 1202 aaKnown RBP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 SPECC1Q5M775 1068 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 SHC4Q6S5L8 630 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 PPFIBP1Q86W92 1011 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 MAP4K3Q8IVH8 894 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 ELOA2Q8IYF1 753 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 SYCP3Q8IZU3 236 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 COLGALT1Q8NBJ5 622 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 ATXN2LQ8WWM7 1075 aaKnown RBP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 DHX58Q96C10 678 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 CPB2Q96IY4 423 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 C17orf80Q9BSJ5 609 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 TLR9Q9NR96 1032 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.78□□□□□ -0.68
NR1I3-220ENST00000505005 TBC1D13Q9NVG8 400 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 MTCH2Q9Y6C9 303 aa10.78□□□□□ -0.68
NR1I3-220ENST00000505005 FRMD3A2A2Y4 597 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 IBSPP21815 317 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 GARTP22102 1010 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 PROZP22891 400 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 RPL9P32969 192 aaKnown RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 PPP1R2P41236 205 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 BCAR1P56945 870 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 ASIC1P78348 528 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 TUSC3Q13454 348 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 E2F4Q16254 413 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms