RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 HYIQ5T013 277 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 PDE12Q6L8Q7 609 aaKnown RBP15.7■□□□□ 0.1
HOXC9-202ENST00000504557 FOXD4L3Q6VB84 417 aaPredicted RBP15.7■□□□□ 0.1
HOXC9-202ENST00000504557 ZBTB33Q86T24 672 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 AK8Q96MA6 479 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 SNTG2Q9NY99 539 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 CACNG4Q9UBN1 327 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 CD207Q9UJ71 328 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 F8W810 466 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 ACKR2O00590 384 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 C2CD2LO14523 706 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 ALDH2P05091 517 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 HARSP12081 509 aaKnown RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 PLCG1P19174 1290 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 LONP1P36776 959 aaKnown RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 EFNA5P52803 228 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 OSTNP61366 133 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 MAPK7Q13164 816 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 MCM6Q14566 821 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 BMS1Q14692 1282 aaKnown RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 COL19A1Q14993 1142 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 FAM187BQ17R55 369 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 NT5DC1Q5TFE4 455 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 ATF7IP2Q5U623 682 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 GPBP1Q86WP2 473 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 VN1R2Q8NFZ6 395 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 RSPH1Q8WYR4 309 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 SNX21Q969T3 373 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 CLIC6Q96NY7 704 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 NGRNQ9NPE2 291 aaKnown RBP15.69■□□□□ 0.1
HOXC9-202ENST00000504557 CLEC1BQ9P126 229 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 GIT1Q9Y2X7 761 aa15.69■□□□□ 0.1
HOXC9-202ENST00000504557 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 C2orf71A6NGG8 1288 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 RECQL4O94761 1208 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 PTPAQ15257 358 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 PUS10Q3MIT2 529 aaKnown RBP15.68■□□□□ 0.1
HOXC9-202ENST00000504557 USP49Q70CQ1 688 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 DDX53Q86TM3 631 aaKnown RBP15.68■□□□□ 0.1
HOXC9-202ENST00000504557 COLGALT2Q8IYK4 626 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 LRRC15Q8TF66 581 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 USP28Q96RU2 1077 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 VN1R3Q9BXE9 311 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 ZBP1Q9H171 429 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 CXCL16Q9H2A7 254 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 FAM50BQ9Y247 325 aa15.68■□□□□ 0.1
HOXC9-202ENST00000504557 PLXNA3P51805 1871 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 CASTOR2A6NHX0 329 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 MBTPS2O43462 519 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 GUCY2CP25092 1073 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 ZNF568Q3ZCX4 644 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 GLRA4Q5JXX5 417 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 FAM178BQ8IXR5 827 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 MRPL43Q8N983 215 aaKnown RBP15.67■□□□□ 0.1
HOXC9-202ENST00000504557 HASPINQ8TF76 798 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 TMEM175Q9BSA9 504 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 TCHPQ9BT92 498 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
HOXC9-202ENST00000504557 CD320Q9NPF0 282 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 ANKFY1Q9P2R3 1169 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 TFIP11Q9UBB9 837 aaKnown RBP15.67■□□□□ 0.1
HOXC9-202ENST00000504557 C5orf42Q9H799 3197 aa15.67■□□□□ 0.1
HOXC9-202ENST00000504557 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 CLASP2O75122 1294 aaKnown RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 NR1I2O75469 434 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 SRGAP2BP0DMP2 458 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 MYBP10242 640 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 PLS3P13797 630 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 MATR3P43243 847 aaKnown RBP eCLIP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 SMTNP53814 917 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 GRIK3Q13003 919 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 STRN3Q13033 797 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 SMAD4Q13485 552 aaKnown RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 ARSHQ5FYA8 562 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 TAS1R3Q7RTX0 852 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 TAS1R1Q7RTX1 841 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 CEP120Q8N960 986 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 GSTCDQ8NEC7 633 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 RAD54LQ92698 747 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 MSLNLQ96KJ4 702 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 B3GALT6Q96L58 329 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 REEP2Q9BRK0 252 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 TIPINQ9BVW5 301 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 MRPL4Q9BYD3 311 aaKnown RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 PANK2Q9BZ23 570 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 BLOC1S4Q9NUP1 217 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 MARCH5Q9NX47 278 aa15.66■□□□□ 0.1
HOXC9-202ENST00000504557 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
HOXC9-202ENST00000504557 PDCD11Q14690 1871 aaKnown RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 FAM13AO94988 1023 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 CTSAP10619 480 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms