RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ATP8A1Q9Y2Q0 1164 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 HS3ST4Q9Y661 456 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 GOLGA8AA7E2F4 631 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 B3GALT2O43825 422 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 BRINP1O60477 761 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 LY86O95711 162 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 LPLP06858 475 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 XPAP23025 273 aaPredicted RBP5.62□□□□□ -1.51
SUB1-204ENST00000504016 WNT3AP56704 352 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
SUB1-204ENST00000504016 VPS72Q15906 364 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 OR52N2Q8NGI0 321 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 NDC1Q9BTX1 674 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 PRDM12Q9H4Q4 367 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
SUB1-204ENST00000504016 USP36Q9P275 1121 aaKnown RBP5.62□□□□□ -1.51
SUB1-204ENST00000504016 APOBEC2Q9Y235 224 aaKnown RBP5.62□□□□□ -1.51
SUB1-204ENST00000504016 COL4A3BPQ9Y5P4 624 aa5.62□□□□□ -1.51
SUB1-204ENST00000504016 AHRRA9YTQ3 701 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 GPR39O43194 453 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 ULK1O75385 1050 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 PRKD3O94806 890 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 APOBEC3AP31941 199 aaPredicted RBP5.61□□□□□ -1.51
SUB1-204ENST00000504016 GZMKP49863 264 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 CDKN1CP49918 316 aaPredicted RBP5.61□□□□□ -1.51
SUB1-204ENST00000504016 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 PHC1P78364 1004 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 DUSP2Q05923 314 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 TAS1R1Q7RTX1 841 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 GAB3Q8WWW8 586 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 PCSK5Q92824 1860 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 GPATCH3Q96I76 525 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
SUB1-204ENST00000504016 SLC46A2Q9BY10 475 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 CPEB1Q9BZB8 566 aaKnown RBP5.61□□□□□ -1.51
SUB1-204ENST00000504016 TRPM5Q9NZQ8 1165 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 KCNG1Q9UIX4 513 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 MCM8Q9UJA3 840 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 PPP2R3BQ9Y5P8 575 aa5.61□□□□□ -1.51
SUB1-204ENST00000504016 COL4A3Q01955 1670 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 CENPVL1A0A0U1RR11 272 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 GRID2IPA4D2P6 1211 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 NRP2O60462 931 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 PFKMP08237 780 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 HSP90B1P14625 803 aaKnown RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 ZFP36P26651 326 aaKnown RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 NRG3P56975 720 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 CCT2P78371 535 aaKnown RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 PTPROQ16827 1216 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 GPR158Q5T848 1215 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 HECTD2Q5U5R9 776 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 LMBR1LQ6UX01 489 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 DOK3Q7L591 496 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 EAF2Q96CJ1 260 aaPredicted RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 MYEOVQ96EZ4 313 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 DCLRE1CQ96SD1 692 aaKnown RBP5.6□□□□□ -1.51
SUB1-204ENST00000504016 TOR3AQ9H497 397 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 C14orf119Q9NWQ9 140 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
SUB1-204ENST00000504016 PRR5-ARHGAP8B1AHC4 643 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 LPXNO60711 386 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 SEC24DO94855 1032 aaPredicted RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 SESN3P58005 492 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 FAM189BP81408 668 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 TAP1Q03518 808 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 MGAT5Q09328 741 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 RNF219Q5W0B1 726 aaPredicted RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 GDF7Q7Z4P5 450 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 SPATS2Q86XZ4 545 aaKnown RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 PRPF38AQ8NAV1 312 aaKnown RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 BEND2Q8NDZ0 799 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 AHCYL2Q96HN2 611 aaKnown RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 FDXACB1Q9BRP7 624 aaPredicted RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 CCDC8Q9H0W5 538 aaPredicted RBP5.59□□□□□ -1.51
SUB1-204ENST00000504016 SPON1Q9HCB6 807 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 ANKFY1Q9P2R3 1169 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 CLCA2Q9UQC9 943 aa5.59□□□□□ -1.51
SUB1-204ENST00000504016 PHLDB1Q86UU1 1377 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 ZAR1LA6NP61 321 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 RNASET2O00584 256 aaKnown RBP5.58□□□□□ -1.52
SUB1-204ENST00000504016 KATNA1O75449 491 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 GPR15P49685 360 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 GUCY2FP51841 1108 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 USP14P54578 494 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
SUB1-204ENST00000504016 CDK17Q00537 523 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 PPARAQ07869 468 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 ITKQ08881 620 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 TRIM25Q14258 630 aaKnown RBP5.58□□□□□ -1.52
SUB1-204ENST00000504016 UGT8Q16880 541 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 CCDC178Q5BJE1 867 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 PITRM1Q5JRX3 1037 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 OLFML1Q6UWY5 402 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 LCORLQ8N3X6 602 aa5.58□□□□□ -1.52
SUB1-204ENST00000504016 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
SUB1-204ENST00000504016 LILRA3Q8N6C8 439 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms