RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 LYPLA2O95372 231 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 ECEL1O95672 775 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 MARCKSL1P49006 195 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CACNB3P54284 484 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 DLG4P78352 724 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CALCOCO2Q13137 446 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CNGA2Q16280 664 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 PADI6Q6TGC4 694 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CRELD2Q6UXH1 353 aaPredicted RBP16.08■□□□□ 0.17
SNF8-203ENST00000504000 NIPA1Q7RTP0 329 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 FAM228AQ86W67 206 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 LRRC34Q8IZ02 419 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 SHC3Q92529 594 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 PLCD4Q9BRC7 762 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 MCM8Q9UJA3 840 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 TPX2Q9ULW0 747 aaKnown RBP16.08■□□□□ 0.17
SNF8-203ENST00000504000 COQ4Q9Y3A0 265 aa16.08■□□□□ 0.17
SNF8-203ENST00000504000 MYH11P35749 1972 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 K7ENM7 598 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 BACH1O14867 736 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 P4HBP07237 508 aaKnown RBP16.08■□□□□ 0.16
SNF8-203ENST00000504000 PLS3P13797 630 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 ITIH2P19823 946 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 MXI1P50539 228 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 MFAP3P55082 362 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 CAV1Q03135 178 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 ENPEPQ07075 957 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 RASA3Q14644 834 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 MESDQ14696 234 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 AADACL2Q6P093 401 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 TRPM8Q7Z2W7 1104 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 KIAA0825Q8IV33 1275 aa16.08■□□□□ 0.16
SNF8-203ENST00000504000 GBP7Q8N8V2 638 aaPredicted RBP16.08■□□□□ 0.16
SNF8-203ENST00000504000 ZNF564Q8TBZ8 553 aaPredicted RBP16.08■□□□□ 0.16
SNF8-203ENST00000504000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNF8-203ENST00000504000 AFF2P51816 1311 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 SNX3O60493 162 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 OAS1P00973 400 aaKnown RBP16.07■□□□□ 0.16
SNF8-203ENST00000504000 ARP10275 920 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 RARAP10276 462 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 PDE6BP35913 854 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 JAG1P78504 1218 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 ELF3P78545 371 aaPredicted RBP16.07■□□□□ 0.16
SNF8-203ENST00000504000 MSL1Q68DK7 614 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 RHBDF2Q6PJF5 856 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 NOP9Q86U38 636 aaKnown RBP16.07■□□□□ 0.16
SNF8-203ENST00000504000 BANK1Q8NDB2 785 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 FAM81BQ96LP2 452 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
SNF8-203ENST00000504000 MXRA8Q9BRK3 442 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 CXorf56Q9H5V9 222 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
SNF8-203ENST00000504000 SPOPO43791 374 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 SGPL1O95470 568 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 EZRP15311 586 aaKnown RBP16.06■□□□□ 0.16
SNF8-203ENST00000504000 GCLMP48507 274 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 FMO1Q01740 532 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 CDR2Q01850 454 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 EXOC3L1Q86VI1 746 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 CCHCR1Q8TD31 782 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 EPS8L3Q8TE67 593 aaKnown RBP16.06■□□□□ 0.16
SNF8-203ENST00000504000 PSPC1Q8WXF1 523 aaKnown RBP16.06■□□□□ 0.16
SNF8-203ENST00000504000 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 TMEM117Q9H0C3 514 aa16.06■□□□□ 0.16
SNF8-203ENST00000504000 ZNF646O15015 1829 aaPredicted RBP16.06■□□□□ 0.16
SNF8-203ENST00000504000 GPC3P51654 580 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNF8-203ENST00000504000 FAM160B2Q86V87 743 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 NLGN1Q8N2Q7 840 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 KREMEN1Q96MU8 473 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 O00370 1275 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 TP73O15350 636 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
SNF8-203ENST00000504000 FGFR4P22455 802 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 GTF2H1P32780 548 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 MKRN3Q13064 507 aaKnown RBP16.05■□□□□ 0.16
SNF8-203ENST00000504000 CCDC63Q8NA47 563 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 GRK7Q8WTQ7 553 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 KIFAP3Q92845 792 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
SNF8-203ENST00000504000 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
SNF8-203ENST00000504000 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 TCRBV7S2A1N4TA0A589 114 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 ATP6V1G2O95670 118 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 VIMP08670 466 aaKnown RBP16.04■□□□□ 0.16
SNF8-203ENST00000504000 CYP11B1P15538 503 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 RARRES1P49788 294 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 HSD17B4P51659 736 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 NCKAP1LP55160 1127 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 GHRHRQ02643 423 aa16.04■□□□□ 0.16
SNF8-203ENST00000504000 PTK6Q13882 451 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms