RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
SYNE4-206ENST00000503121 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
SYNE4-206ENST00000503121 DDX53Q86TM3 631 aaKnown RBP13.24□□□□□ -0.29
SYNE4-206ENST00000503121 RPS6KC1Q96S38 1066 aa13.24□□□□□ -0.29
SYNE4-206ENST00000503121 CDCA3Q99618 268 aaPredicted RBP13.24□□□□□ -0.29
SYNE4-206ENST00000503121 MIOSQ9NXC5 875 aa13.24□□□□□ -0.29
SYNE4-206ENST00000503121 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
SYNE4-206ENST00000503121 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 FSD2A1L4K1 749 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 INPPL1O15357 1258 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SLC16A4O15374 487 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 TBX10O75333 385 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 EDN1P05305 212 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SRGAP2BP0DMP2 458 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 PLS3P13797 630 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 PLCG1P19174 1290 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 MAPK7Q13164 816 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SPECC1Q5M775 1068 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 NT5DC1Q5TFE4 455 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 MRPL43Q8N983 215 aaKnown RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 USP28Q96RU2 1077 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 MRPL4Q9BYD3 311 aaKnown RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SNTG2Q9NY99 539 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
SYNE4-206ENST00000503121 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
SYNE4-206ENST00000503121 ATG2AQ2TAZ0 1938 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 C2orf71A6NGG8 1288 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 TXLNAP40222 546 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 STRN3Q13033 797 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 MCM6Q14566 821 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 DCAF4L1Q3SXM0 396 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 ARSHQ5FYA8 562 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 LLGL2Q6P1M3 1020 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 GPBP1Q86WP2 473 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 SPIRE2Q8WWL2 714 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 AUTS2Q8WXX7 1259 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 RAD54LQ92698 747 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 TCHPQ9BT92 498 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-206ENST00000503121 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
SYNE4-206ENST00000503121 RECQL4O94761 1208 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 FAM13AO94988 1023 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 GLP2RO95838 553 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 CTSAP10619 480 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 DSC1Q08554 894 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 GRIK3Q13003 919 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 SMAD4Q13485 552 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 GIT2Q14161 759 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 STK38Q15208 465 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ACO2Q99798 780 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-206ENST00000503121 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
SYNE4-206ENST00000503121 BDP1A6H8Y1 2624 aa13.2□□□□□ -0.3
SYNE4-206ENST00000503121 H0YCG3 227 aa13.2□□□□□ -0.3
SYNE4-206ENST00000503121 MBTPS2O43462 519 aa13.2□□□□□ -0.3
SYNE4-206ENST00000503121 THP07101 528 aa13.2□□□□□ -0.3
SYNE4-206ENST00000503121 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-206ENST00000503121 DDIT3P35638 169 aa13.2□□□□□ -0.3
SYNE4-206ENST00000503121 OSTNP61366 133 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms