RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TROAPQ12815 778 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 GPS1Q13098 491 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 ART3Q13508 389 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 UVRAGQ9P2Y5 699 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 MAGEA13PA6NCF6 341 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 F8VZ95 297 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 TTC4O95801 387 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 SERPINB4P48594 390 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 ZNF844Q08AG5 666 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 CFAP36Q96G28 342 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 MYBL1P10243 752 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 VAMP7P51809 220 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 CENPPQ6IPU0 288 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 MCF2L2Q86YR7 1114 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 RANBP17Q9H2T7 1088 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 ALG6Q9Y672 507 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 PDE2AO00408 941 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 ABCD1P33897 745 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 EPHB1P54762 984 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 NPEPPSP55786 919 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 SH3RF1Q7Z6J0 888 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 KCTD6Q8NC69 237 aa18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 ALKBH8Q96BT7 664 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 PAPOLBQ9NRJ5 636 aaKnown RBP18.3■□□□□ 0.52
HMGXB3-201ENST00000502717 PJA2O43164 708 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 RARGP13631 454 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 PAPOLAP51003 745 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 KYNUQ16719 465 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 DNAL1Q4LDG9 190 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 MREGQ8N565 214 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 GLG1Q92896 1179 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 RBM15Q96T37 977 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■□□ 15.9
HMGXB3-201ENST00000502717 NPHS2Q9NP85 383 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 UBN1Q9NPG3 1134 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 APEX2Q9UBZ4 518 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 SLC1A1P43005 524 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 HAUS8Q9BT25 410 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 CALN1Q9BXU9 219 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 MID2Q9UJV3 735 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 SLIT1O75093 1534 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 KPNB1Q14974 876 aaKnown RBP18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 ZSCAN5CA6NGD5 496 aaPredicted RBP18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 GOLGA8SH3BPF8 625 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 CIAPIN1Q6FI81 312 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 TRIM50Q86XT4 487 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 SLC26A7Q8TE54 656 aa18.29■□□□□ 0.52
HMGXB3-201ENST00000502717 GRIN3BO60391 1043 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 CRELD2Q6UXH1 353 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 RNF25Q96BH1 459 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 DCLRE1BQ9H816 532 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 HNRNPCP07910 306 aaKnown RBP eCLIP18.28■□□□□ 0.527e-7■■■□□ 18.7
HMGXB3-201ENST00000502717 TRIM49P0CI25 452 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 TRIM49CP0CI26 452 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 ELF3P78545 371 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 HIC1Q14526 733 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 RXFP1Q9HBX9 757 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 GOLGA8IPA6NC78 632 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 GOLGA8JA6NMD2 632 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 TMEM191BP0C7N4 346 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■■□ 24.4
HMGXB3-201ENST00000502717 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 C2orf69Q8N8R5 385 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 C9orf72Q96LT7 481 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 CSRNP1Q96S65 589 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 CFLARO15519 480 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 MYBL2P10244 700 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 EPS8L3Q8TE67 593 aaKnown RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 MAGEB18Q96M61 343 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 TSSK1BQ9BXA7 367 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 FAM53CQ9NYF3 392 aa18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 MTO1Q9Y2Z2 717 aaKnown RBP18.28■□□□□ 0.52
HMGXB3-201ENST00000502717 ZNF233A6NK53 670 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 NPR1P16066 1061 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 MX2P20592 715 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 FNTAP49354 379 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 SLC44A5Q8NCS7 719 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 NEDD1Q8NHV4 660 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 CNOT7Q9UIV1 285 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 SKAP2O75563 359 aaPredicted RBP18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 ZBTB7AO95365 584 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 GNAT1P11488 350 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 CCDC68Q9H2F9 335 aa18.27■□□□□ 0.52
HMGXB3-201ENST00000502717 TCP10L2B9ZVM9 353 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L15C9J2P7 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L11C9JVI0 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L18D6R9N7 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L22D6RA61 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms