RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ERP44Q9BS26 406 aa17.84■□□□□ 0.45
VCAN-204ENST00000502527 AS3MTQ9HBK9 375 aa17.84■□□□□ 0.45
VCAN-204ENST00000502527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.45
VCAN-204ENST00000502527 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
VCAN-204ENST00000502527 ERLIN2O94905 339 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 GGPS1O95749 300 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 PSAPP07602 524 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 CCT5P48643 541 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 OAZ1P54368 228 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 ENPEPQ07075 957 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 BIRC3Q13489 604 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 MESDQ14696 234 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.45
VCAN-204ENST00000502527 DUPD1Q68J44 220 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 ADAT2Q7Z6V5 191 aaKnown RBP17.83■□□□□ 0.45
VCAN-204ENST00000502527 SLC47A2Q86VL8 602 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 MCPH1Q8NEM0 835 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 HELQQ8TDG4 1101 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.45
VCAN-204ENST00000502527 BSNDQ8WZ55 320 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 TRIM51Q9BSJ1 452 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 FAM107BQ9H098 131 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.45
VCAN-204ENST00000502527 RAB20Q9NX57 234 aa17.83■□□□□ 0.45
VCAN-204ENST00000502527 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 EBAG9O00559 213 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 CYP1A2P05177 515 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 CYP11B1P15538 503 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 COMTP21964 271 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 FLT3P36888 993 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 PDE6CP51160 858 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 RTP1P59025 263 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 TGFB2P61812 414 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 FMO1Q01740 532 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 CDR2Q01850 454 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 CYP24A1Q07973 514 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 DHX9Q08211 1270 aaKnown RBP17.83■□□□□ 0.44
VCAN-204ENST00000502527 ZNF844Q08AG5 666 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 SPDYCQ5MJ68 293 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 SCYL3Q8IZE3 742 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 POMGNT1Q8WZA1 660 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 WNK4Q96J92 1243 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
VCAN-204ENST00000502527 FEZ2Q9UHY8 353 aaPredicted RBP17.83■□□□□ 0.44
VCAN-204ENST00000502527 RASAL2Q9UJF2 1139 aa17.83■□□□□ 0.44
VCAN-204ENST00000502527 ZNF862O60290 1169 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 DGAT1O75907 488 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 MMEP08473 750 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 KCNA2P16389 499 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 CHRNA3P32297 505 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 SKIDA1Q1XH10 827 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 BRDTQ58F21 947 aaPredicted RBP17.82■□□□□ 0.44
VCAN-204ENST00000502527 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
VCAN-204ENST00000502527 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 SNRNP48Q6IEG0 339 aaKnown RBP17.82■□□□□ 0.44
VCAN-204ENST00000502527 KRT35Q92764 455 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 CDHR1Q96JP9 859 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 FMO2Q99518 471 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 CENPHQ9H3R5 247 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 ERVK-5Q9HDB9 667 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 HACL1Q9UJ83 578 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
VCAN-204ENST00000502527 ZEB2O60315 1214 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 PHF2O75151 1096 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 STBD1O95210 358 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 GARTP22102 1010 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 ABCD1P33897 745 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 PEX5P50542 639 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 DRG2P55039 364 aaKnown RBP17.81■□□□□ 0.44
VCAN-204ENST00000502527 SLC39A4Q6P5W5 647 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 REPS2Q8NFH8 660 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 OR2W6PQ8NHA6 318 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 TAS1R2Q8TE23 839 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 ATP8B4Q8TF62 1192 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 TRIM31Q9BZY9 425 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 RASSF4Q9H2L5 321 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 UVRAGQ9P2Y5 699 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 NFASCO94856 1347 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 H0YCG3 227 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 PPFIA2O75334 1257 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 LSP1P33241 339 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 MDH1P40925 334 aaKnown RBP17.81■□□□□ 0.44
VCAN-204ENST00000502527 CORO7P57737 925 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 SWSAP1Q6NVH7 229 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 ENOSF1Q7L5Y1 443 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 JAMLQ86YT9 394 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 C10orf67Q8IYJ2 551 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 GPD1LQ8N335 351 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 ZNF564Q8TBZ8 553 aaPredicted RBP17.81■□□□□ 0.44
VCAN-204ENST00000502527 IFT74Q96LB3 600 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 NUP85Q9BW27 656 aa17.81■□□□□ 0.44
VCAN-204ENST00000502527 JPH1Q9HDC5 661 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms