RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 PDRG1Q9NUG6 133 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 DPP7Q9UHL4 492 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 PCDHB2Q9Y5E7 798 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 ZDBF2Q9HCK1 2354 aa12.43□□□□□ -0.42
UBE2D3-211ENST00000502404 TRIOO75962 3097 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 CCNT1O60563 726 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 SP100P23497 879 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 KLRC2P26717 231 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 EPHA7Q15375 998 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 MRPL10Q7Z7H8 261 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 HACE1Q8IYU2 909 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 LPPQ93052 612 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 SH2D3AQ9BRG2 576 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
UBE2D3-211ENST00000502404 C2CD4DB7Z1M9 353 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 ERLIN2O94905 339 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 AXLP30530 894 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 NPEPPSP55786 919 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 TFDP1Q14186 410 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 MCM6Q14566 821 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 PLA2G4FQ68DD2 849 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 OTOP3Q7RTS5 596 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 SLC22A17Q8WUG5 538 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 ATOH1Q92858 354 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 CCDC51Q96ER9 411 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 MFSD1Q9H3U5 465 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 DHX33Q9H6R0 707 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 KCNMB3Q9NPA1 279 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 MRPL17Q9NRX2 175 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 KCNJ14Q9UNX9 436 aa12.41□□□□□ -0.42
UBE2D3-211ENST00000502404 EML1O00423 815 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 SLC37A4O43826 429 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 S1PR4O95977 384 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 ITGA4P13612 1032 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 SLC11A1P49279 550 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 TCF15Q12870 199 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 ANKRD1Q15327 319 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 NPY5RQ15761 445 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 PTPRNQ16849 979 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 XKR9Q5GH70 373 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 AUTS2Q8WXX7 1259 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 TSC1Q92574 1164 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 TMEM143Q96AN5 459 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 CCDC43Q96MW1 224 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 VAV3Q9UKW4 847 aa12.4□□□□□ -0.42
UBE2D3-211ENST00000502404 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 URODP06132 367 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 ADH1AP07327 375 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 EPCAMP16422 314 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 VCPP55072 806 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 POU5F1BQ06416 359 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 EMC2Q15006 297 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 PTPN14Q15678 1187 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 NOTUMQ6P988 496 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 TMC5Q6UXY8 1006 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 C15orf39Q6ZRI6 1047 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 CCDC149Q6ZUS6 474 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 GPR149Q86SP6 731 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 FERMT3Q86UX7 667 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 TMEM173Q86WV6 379 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 ZNF280BQ86YH2 543 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 KLHL5Q96PQ7 755 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 LXNQ9BS40 222 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
UBE2D3-211ENST00000502404 NRP1O14786 923 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 BRD1O95696 1058 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 POMCP01189 267 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 WEE2P0C1S8 567 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 CLCN5P51795 746 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms