RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PIDD1Q9HB75 910 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 CHST7Q9NS84 486 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
SEC61A1-207ENST00000498837 CPLX1O14810 134 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 TGM5O43548 720 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 PAPLNO95428 1278 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 LAMP2P13473 410 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 RPL17P18621 184 aaKnown RBP16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 PTENP60484 403 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 STK3Q13188 491 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 GALNT17Q6IS24 598 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 NOTUMQ6P988 496 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 LILRA6Q6PI73 481 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 NXPE3Q969Y0 559 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 MTRQ99707 1265 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 XPNPEP1Q9NQW7 623 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 DLGAP2Q9P1A6 1054 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.2
SEC61A1-207ENST00000498837 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 DTNBO60941 627 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 AXLP30530 894 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 HTR4Q13639 388 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 PPP4R3AQ6IN85 833 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 FUT10Q6P4F1 479 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 GET4Q7L5D6 327 aaPredicted RBP16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 OTUD6AQ7L8S5 288 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 NEK8Q86SG6 692 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 KIAA2013Q8IYS2 634 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 RMDN1Q96DB5 314 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 PHF20Q9BVI0 1012 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 PRKD2Q9BZL6 878 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 SIT1Q9Y3P8 196 aa16.32■□□□□ 0.2
SEC61A1-207ENST00000498837 ANHXE9PGG2 379 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 INO80B-WBP1J3KQ70 363 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 CCNT1O60563 726 aaKnown RBP16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 NR1I2O75469 434 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 AKAP5P24588 427 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 AMHR2Q16671 573 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 PHLDB3Q6NSJ2 640 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 ASAP3Q8TDY4 903 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 CCDC51Q96ER9 411 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 RPP25Q9BUL9 199 aaKnown RBP16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 ARHGEF3Q9NR81 526 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 GJB4Q9NTQ9 266 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 CACNG4Q9UBN1 327 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 GIT1Q9Y2X7 761 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 NUMBLQ9Y6R0 609 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 GPR179Q6PRD1 2367 aa16.31■□□□□ 0.2
SEC61A1-207ENST00000498837 SPTBN2O15020 2390 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 POTEMA6NI47 508 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 B4GALT5O43286 388 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 MARCH6O60337 910 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 LRRN2O75325 713 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 SLITRK3O94933 977 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 SP9P0CG40 484 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 GLULP15104 373 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 ARF4P18085 180 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 MBTD1Q05BQ5 628 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 CAPSQ13938 189 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 DCLRE1AQ6PJP8 1040 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 TRIM6Q9C030 488 aaPredicted RBP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 SLC2A4RGQ9NR83 387 aa16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.3■□□□□ 0.2
SEC61A1-207ENST00000498837 MED19A0JLT2 244 aaPredicted RBP16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 TBX3O15119 743 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 ZMYND10O75800 440 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 NPTXRO95502 500 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms