RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 TRAF5O00463 557 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 BUB1O43683 1085 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 BBOX1O75936 387 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 SYF2O95926 243 aaKnown RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 LRGUKQ96M69 825 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 RAB34Q9BZG1 259 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 KIAA1586Q9HCI6 787 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 ANKEF1Q9NU02 776 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 SNX12Q9UMY4 172 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 PCDHA12Q9UN75 941 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 THSD7AQ9UPZ6 1657 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 POTEB3A0JP26 581 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 POTECB2RU33 542 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 GPR39O43194 453 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 TOM1O60784 492 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 IL33O95760 270 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 F12P00748 615 aaPredicted RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 TAL1P17542 331 aaPredicted RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 CAPN2P17655 700 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 SLC1A4P43007 532 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 SNAP25P60880 206 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 SLC7A5Q01650 507 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 LRRC63Q05C16 580 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 CKAP4Q07065 602 aaKnown RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 ORC2Q13416 577 aaPredicted RBP9.67□□□□□ -0.86
FN1-227ENST00000498719 GBX1Q14549 363 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 STAT4Q14765 748 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 HSP90B2PQ58FF3 399 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 POTEBQ6S5H4 581 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 NXPE4Q6UWF7 544 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 CACNA2D4Q7Z3S7 1137 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 SLC41A1Q8IVJ1 513 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 TRIM58Q8NG06 486 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 EDEM1Q92611 657 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 CUL5Q93034 780 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 FAM167BQ9BTA0 163 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 LRRC1Q9BTT6 524 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 FAM204AQ9H8W3 233 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 PSTPIP2Q9H939 334 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 KCNQ5Q9NR82 932 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 PANK4Q9NVE7 773 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 FAM8A1Q9UBU6 413 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 HPCAL4Q9UM19 191 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 JRKLQ9Y4A0 524 aa9.67□□□□□ -0.86
FN1-227ENST00000498719 LTBP1Q14766 1721 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 IPO5O00410 1097 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 ZBTB5O15062 677 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TLR2O60603 784 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 USO1O60763 962 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 RNF40O75150 1001 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 NOL4O94818 638 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 KRT20P35900 424 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 MAGEA1P43355 309 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 DNA2P51530 1060 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TCP10Q12799 353 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TDRD12Q587J7 1177 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 ZC3H12BQ5HYM0 836 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 FAM26FQ5R3K3 315 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 MRM1Q6IN84 353 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 LRRTM3Q86VH5 581 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 FAM186BQ8IYM0 893 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 SAMD14Q8IZD0 417 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 ADAM32Q8TC27 787 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 NSUN6Q8TEA1 469 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 LUC7LQ9NQ29 371 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 ZNF358Q9NW07 568 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 SERTM1A2A2V5 107 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TMEM127O75204 238 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TACC1O75410 805 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 PDGFAP04085 211 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TUBBP07437 444 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 MAP2K1Q02750 393 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 LMNB2Q03252 620 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 ASTE1Q2TB18 679 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 CCDC40Q4G0X9 1142 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 HEATR6Q6AI08 1181 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 HIBCHQ6NVY1 386 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 CDC42EP5Q6NZY7 148 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 CCNI2Q6ZMN8 369 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 FAM71BQ8TC56 605 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 MS4A14Q96JA4 679 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 OSBPL9Q96SU4 736 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 P2RX7Q99572 595 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 BARD1Q99728 777 aaKnown RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 CRB3Q9BUF7 120 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms