RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 ERVFC1P60507 584 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 GIT2Q14161 759 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 DCAF4L1Q3SXM0 396 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 PLPP4Q5VZY2 271 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 SV2BQ7L1I2 683 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 TMC7Q7Z402 723 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
ABCF3-218ENST00000498136 PDILTQ8N807 584 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 UBE2ZQ9H832 354 aaPredicted RBP18.36■□□□□ 0.53
ABCF3-218ENST00000498136 PARVGQ9HBI0 331 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 CFAP45Q9UL16 551 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
ABCF3-218ENST00000498136 H0YCG3 227 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 K7ENM7 598 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 CUTAO60888 179 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 ALDH2P05091 517 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 GALTP07902 379 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 OR1G1P47890 313 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 SLC11A1P49279 550 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
ABCF3-218ENST00000498136 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TJAP1Q5JTD0 557 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TAS1R3Q7RTX0 852 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 ASB2Q96Q27 587 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 ACO2Q99798 780 aaKnown RBP18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 NTPCRQ9BSD7 190 aaKnown RBP18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TCHPQ9BT92 498 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
ABCF3-218ENST00000498136 TNFSF13BQ9Y275 285 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 FAN1Q9Y2M0 1017 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 GDAQ9Y2T3 454 aa18.35■□□□□ 0.53
ABCF3-218ENST00000498136 B4GALT3O60512 393 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 NR1I2O75469 434 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 RECQL4O94761 1208 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 MAPTP10636 758 aaKnown RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 HARSP12081 509 aaKnown RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 KCNA5P22460 613 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 GTF2F1P35269 517 aaKnown RBP eCLIP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 MATR3P43243 847 aaKnown RBP eCLIP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 ME1P48163 572 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 NRIP1P48552 1158 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 HYAL1Q12794 435 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 BMS1Q14692 1282 aaKnown RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 PDE12Q6L8Q7 609 aaKnown RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 HAUS6Q7Z4H7 955 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 TMEM161BQ8NDZ6 487 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 PABPC5Q96DU9 382 aaKnown RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 BICD1Q96G01 975 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 TMEM175Q9BSA9 504 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 MIOSQ9NXC5 875 aa18.34■□□□□ 0.53
ABCF3-218ENST00000498136 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
ABCF3-218ENST00000498136 A0A087X0B3 334 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 NRP1O14786 923 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 NCK2O43639 380 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 TRAK2O60296 914 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 BRD1O95696 1058 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 NCKAP1LP55160 1127 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 GRIK3Q13003 919 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 TMEM173Q86WV6 379 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-218ENST00000498136 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 DDX12PQ92771 950 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 TLE6Q9H808 572 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 NGRNQ9NPE2 291 aaKnown RBP18.33■□□□□ 0.52
ABCF3-218ENST00000498136 ANKFY1Q9P2R3 1169 aa18.33■□□□□ 0.52
ABCF3-218ENST00000498136 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-218ENST00000498136 INPPL1O15357 1258 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 KCNQ1P51787 676 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 ZNF131P52739 623 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 OSTNP61366 133 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
ABCF3-218ENST00000498136 MPZL3Q6UWV2 235 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 COLGALT2Q8IYK4 626 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 VPS52Q8N1B4 723 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 BCL7CQ8WUZ0 217 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-218ENST00000498136 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-218ENST00000498136 CDT1Q9H211 546 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 XIRP2A4UGR9 3374 aa18.32■□□□□ 0.52
ABCF3-218ENST00000498136 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
ABCF3-218ENST00000498136 MYMKA6NI61 221 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 H3BQ06 376 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-218ENST00000498136 FSCN2O14926 492 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 PER2O15055 1255 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 LINC01565O15544 149 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 THP07101 528 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 IDEP14735 1019 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 NDUFV1P49821 464 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 YARSP54577 528 aaKnown RBP18.31■□□□□ 0.52
ABCF3-218ENST00000498136 SHC4Q6S5L8 630 aa18.31■□□□□ 0.52
ABCF3-218ENST00000498136 DDX53Q86TM3 631 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms