RNA–Protein interactions for RNA: ENST00000497559.1

TNRC6B-209, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 5

Gene TNRC6B, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-209ENST00000497559 PABPC4Q13310 644 aaKnown RBP eCLIP6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 ABHD17BQ5VST6 288 aa6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 GLCCI1Q86VQ1 547 aa6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 SIMC1Q8NDZ2 872 aa6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 ADAM2Q99965 735 aa6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 OSBPL2Q9H1P3 480 aa6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 THG1LQ9NWX6 298 aaKnown RBP6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 CDK11AQ9UQ88 783 aaPredicted RBP6.99□□□□□ -1.29
TNRC6B-209ENST00000497559 PRSS38A1L453 326 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 B5MCH6 92 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 INO80B-WBP1J3KQ70 363 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 RBP3P10745 1247 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 CDK4P11802 303 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 MGAT1P26572 445 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 CANXP27824 592 aaKnown RBP6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 CXCR5P32302 372 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 PLA2G5P39877 138 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 PTH2RP49190 550 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 BLOC1S1P78537 153 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 TP53BP2Q13625 1128 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 EFCAB12Q6NXP0 572 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 CDC5LQ99459 802 aaKnown RBP6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 INO80BQ9C086 356 aaPredicted RBP6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 POGKQ9P215 609 aa6.98□□□□□ -1.29
TNRC6B-209ENST00000497559 TBKBP1A7MCY6 615 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 ZNF891A8MT65 544 aaPredicted RBP6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 KPNA6O60684 536 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 LTA4HP09960 611 aaKnown RBP6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 SPATA31D3P0C874 917 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 GPR158Q5T848 1215 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 SPATA31D4Q6ZUB0 917 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 GLB1L2Q8IW92 636 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 FAM177A1Q8N128 213 aaPredicted RBP6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 FAM98AQ8NCA5 519 aaKnown RBP6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 ASB10Q8WXI3 467 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 NUMBLQ9Y6R0 609 aa6.97□□□□□ -1.29
TNRC6B-209ENST00000497559 SPDEFO95238 335 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 ASMTLO95671 621 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 ESRRBO95718 433 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 EGR2P11161 476 aaPredicted RBP6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 PPARAQ07869 468 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 DDB1Q16531 1140 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 FAM102AQ5T9C2 384 aaPredicted RBP6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 UBXN4Q92575 508 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 NELL1Q92832 810 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 TMPRSS11EQ9UL52 423 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 MAP3K2Q9Y2U5 619 aa6.96□□□□□ -1.3
TNRC6B-209ENST00000497559 LCHNA4D1U4 455 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 NEK4P51957 841 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 ELLP55199 621 aaPredicted RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 RESTQ13127 1097 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 NFE2L2Q16236 605 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 C19orf54Q5BKX5 351 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 METRNLQ641Q3 311 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 ZNF610Q8N9Z0 462 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 RNF169Q8NCN4 708 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 ALG13Q9NP73 1137 aaKnown RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 EVLQ9UI08 416 aaPredicted RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 PRSS50Q9UI38 385 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 FPGT-TNNI3KV9GXZ4 949 aa6.95□□□□□ -1.3
TNRC6B-209ENST00000497559 PRAMEF4O60810 478 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 ITGA10O75578 1167 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 CDK11BP21127 795 aaKnown RBP6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 MPLP40238 635 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 PHC1P78364 1004 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 BMS1Q14692 1282 aaKnown RBP6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 RSAD2Q8WXG1 361 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 LRFN3Q9BTN0 628 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 MS4A5Q9H3V2 200 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 RNF181Q9P0P0 153 aa6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 POLR2AP24928 1970 aaKnown RBP6.94□□□□□ -1.3
TNRC6B-209ENST00000497559 FAM83GA6ND36 823 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 POU3F2P20265 443 aaPredicted RBP6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 LSP1P33241 339 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 MEF2AQ02078 507 aaPredicted RBP6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 MPP3Q13368 585 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 ABHD15Q6UXT9 468 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 SNX33Q8WV41 574 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 SLC9A6Q92581 669 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 NEU1Q99519 415 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 PPP2R3BQ9Y5P8 575 aa6.93□□□□□ -1.3
TNRC6B-209ENST00000497559 ITGAMP11215 1152 aa6.92□□□□□ -1.3
TNRC6B-209ENST00000497559 MXRA7P84157 204 aa6.92□□□□□ -1.3
TNRC6B-209ENST00000497559 HDGFL2Q7Z4V5 671 aaPredicted RBP6.92□□□□□ -1.3
TNRC6B-209ENST00000497559 SLC41A1Q8IVJ1 513 aa6.92□□□□□ -1.3
TNRC6B-209ENST00000497559 ZFP28Q8NHY6 868 aa6.92□□□□□ -1.3
TNRC6B-209ENST00000497559 CAGE1Q8TC20 777 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms