RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 UHMK1Q8TAS1 419 aaKnown RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 ZNF417Q8TAU3 575 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 ZNF587Q96SQ5 575 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 ACSS3Q9H6R3 686 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 TM7SF3Q9NS93 570 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 LMBRD1Q9NUN5 540 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 BTG4Q9NY30 223 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 ZSWIM5Q9P217 1185 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 SRP68Q9UHB9 627 aaKnown RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 MASP2O00187 686 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 FOXP2O15409 715 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 DAPK3O43293 454 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 DOK2O60496 412 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 NPHS1O60500 1241 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 BUB1BO60566 1050 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 ARIH2O95376 493 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 PFKMP08237 780 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 ALOX15P16050 662 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 FPR2P25090 351 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 STAT5AP42229 794 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 AFMP43652 599 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 MAP2K3P46734 347 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 MUM1L1Q5H9M0 696 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 ANKRD45Q5TZF3 282 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 HAUS3Q68CZ6 603 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 TDRD7Q8NHU6 1098 aaKnown RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 CYP2W1Q8TAV3 490 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 ADAMTS15Q8TE58 950 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 RSAD2Q8WXG1 361 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 IQCDQ96DY2 449 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 FAM167AQ96KS9 214 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 TIGD1Q96MW7 591 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 KATNAL1Q9BW62 490 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 AGXT2Q9BYV1 514 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 STK32BQ9NY57 414 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 COL20A1Q9P218 1284 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 ORC3Q9UBD5 711 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 AFF4Q9UHB7 1163 aaKnown RBP6.92□□□□□ -1.3
BRCA1-224ENST00000497488 PRSS50Q9UI38 385 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 SCOCQ9UIL1 159 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 FEM1BQ9UK73 627 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 MAN2B2Q9Y2E5 1009 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 CDY2AQ9Y6F7 541 aa6.92□□□□□ -1.3
BRCA1-224ENST00000497488 UBA6A0AVT1 1052 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-224ENST00000497488 DGKIO75912 1065 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 APOL3O95236 402 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 CBX7O95931 251 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 C4BPAP04003 597 aaKnown RBP6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SYPP08247 313 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 RAC2P15153 192 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 EN2P19622 333 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-224ENST00000497488 RAB6AP20340 208 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 AOAHP28039 575 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 ATICP31939 592 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 GJA4P35212 333 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 PAPOLAP51003 745 aaKnown RBP6.91□□□□□ -1.3
BRCA1-224ENST00000497488 WASHC5Q12768 1159 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SULT6B1Q6IMI4 303 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 ACAD11Q709F0 780 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 HEATR3Q7Z4Q2 680 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 TCP11L2Q8N4U5 519 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 C3orf20Q8ND61 904 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 OR14C36Q8NHC7 312 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 STYXQ8WUJ0 223 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 RUBCNQ92622 972 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 VMP1Q96GC9 406 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SUCLG2Q96I99 432 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 RADILQ96JH8 1075 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 MPHOSPH8Q99549 860 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 GDF15Q99988 308 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 PDCD2LQ9BRP1 358 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 ADI1Q9BV57 179 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 EIF2AQ9BY44 585 aaKnown RBP6.91□□□□□ -1.3
BRCA1-224ENST00000497488 GHITMQ9H3K2 345 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SLC6A20Q9NP91 592 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 SERHLQ9NQF3 203 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 CEP72Q9P209 647 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 ZNF112Q9UJU3 913 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 X6R8D5 127 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
BRCA1-224ENST00000497488 FAM234BA2RU67 622 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 FAM90A27PA6NNH2 459 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 PODXLO00592 558 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 FAM155BO75949 473 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 URI1O94763 535 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
BRCA1-224ENST00000497488 SLC3A2P08195 630 aaKnown RBP6.9□□□□□ -1.3
BRCA1-224ENST00000497488 ITGA5P08648 1049 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms